4YEF
beta1 carbohydrate binding module (CBM) of AMP-activated protein kinase (AMPK) in complex with glucosyl-beta-cyclododextrin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-11-27 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.953700 |
Spacegroup name | P 1 |
Unit cell lengths | 40.718, 68.394, 92.211 |
Unit cell angles | 111.72, 95.56, 90.06 |
Refinement procedure
Resolution | 43.710 - 1.720 |
R-factor | 0.17944 |
Rwork | 0.178 |
R-free | 0.21312 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1z0m |
RMSD bond length | 0.012 |
RMSD bond angle | 1.605 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.710 | 1.750 |
High resolution limit [Å] | 1.720 | 1.720 |
Rmerge | 0.043 | 0.628 |
Number of reflections | 95126 | |
<I/σ(I)> | 18.6 | 1.9 |
Completeness [%] | 97.1 | 92.9 |
Redundancy | 3.9 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 281.15 | 0.2 M lithium sulphate, 25 % w/v PEG 8000 and 0.1 M sodium acetate pH 4.5 |