4Y4Y
T=1 capsid structure of SeMV Ndel65CP fused with B-domain of S. aureus protein SpA at the N-terminus (C2 crystal form)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E... | Immunoglobulin G-binding protein A,Coat protein | polymer | 282 | 30543.2 | 30 | UniProt (P02976) UniProt (Q9EB06) Pfam (PF02216) Pfam (PF00729) In PDB | Staphylococcus aureus | IgG-binding protein A,Staphylococcal protein A |
2 | D, H, L, M, S... | SULFATE ION | non-polymer | 96.1 | 6 | Chemie (SO4) | |||
3 | water | water | 18.0 | 435 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d: 5 - 58 (UniProt: P02976)
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d: 66 - 268 (UniProt: Q9EB06)
PDB | External Database | Details |
---|---|---|
Met -13 | - | expression tag |
Arg -12 | - | expression tag |
Gly -11 | - | expression tag |
Ser -10 | - | expression tag |
His -9 | - | expression tag |
His -8 | - | expression tag |
His -7 | - | expression tag |
His -6 | - | expression tag |
His -5 | - | expression tag |
His -4 | - | expression tag |
Gly -3 | - | expression tag |
Met -2 | - | expression tag |
Ala -1 | - | expression tag |
Ser 0 | - | expression tag |
Met 1 | - | expression tag |
Asp 2 | - | expression tag |
Asn 3 | - | expression tag |
Lys 4 | - | expression tag |
Glu 59 | - | linker |
Gly 60 | - | linker |
Ser 61 | - | linker |
Glu 62 | - | linker |
Leu 63 | - | linker |
Glu 64 | - | linker |
Met 65 | - | linker |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 30 |
Total formula weight | 916296.4 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 576.4 | |
All* | Total formula weight | 916872.8 |