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4Y4Y

T=1 capsid structure of SeMV Ndel65CP fused with B-domain of S. aureus protein SpA at the N-terminus (C2 crystal form)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...Immunoglobulin G-binding protein A,Coat proteinpolymer28230543.230UniProt (P02976)
UniProt (Q9EB06)
Pfam (PF02216)
Pfam (PF00729)
In PDB
Staphylococcus aureusIgG-binding protein A,Staphylococcal protein A
2D, H, L, M, S...SULFATE IONnon-polymer96.16Chemie (SO4)
3waterwater18.0435Chemie (HOH)
Sequence modifications
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d: 5 - 58 (UniProt: P02976)
PDBExternal DatabaseDetails
Met -13-expression tag
Arg -12-expression tag
Gly -11-expression tag
Ser -10-expression tag
His -9-expression tag
His -8-expression tag
His -7-expression tag
His -6-expression tag
His -5-expression tag
His -4-expression tag
Gly -3-expression tag
Met -2-expression tag
Ala -1-expression tag
Ser 0-expression tag
Met 1-expression tag
Asp 2-expression tag
Asn 3-expression tag
Lys 4-expression tag
Glu 59-linker
Gly 60-linker
Ser 61-linker
Glu 62-linker
Leu 63-linker
Glu 64-linker
Met 65-linker
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d: 66 - 268 (UniProt: Q9EB06)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains30
Total formula weight916296.4
Non-Polymers*Number of molecules6
Total formula weight576.4
All*Total formula weight916872.8
*Water molecules are not included.

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PDB entries from 2024-10-02

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