4XQU
Crystal structure of hemagglutinin from Jiangxi-Donghu (2013) H10N8 influenza virus in complex with 3'-SLN
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E | Hemagglutinin HA1 | polymer | 326 | 35682.3 | 3 | UniProt (A0A059T4A1) Pfam (PF00509) In PDB | Influenza A virus | |
2 | B, D, F | Hemagglutinin HA2 | polymer | 181 | 20755.8 | 3 | UniProt (A0A059T4A1) Pfam (PF00509) In PDB | Influenza A virus | |
3 | G, I | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 674.6 | 2 | In PDB BIRD (PRD_900067) GlyTouCan (G00065MO) | 3'-sialyl-N-acetyllactosamine | ||
4 | H, J | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
5 | K | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose | branched | 471.4 | 1 | In PDB GlyTouCan (G30207PZ) | |||
6 | A, C, E | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) |
Sequence modifications
A, C, E: 11 - 330 (UniProt: A0A059T4A1)
B, D, F: 1 - 174 (UniProt: A0A059T4A1)
PDB | External Database | Details |
---|---|---|
Ala 8 | - | expression tag |
Asp 9 | - | expression tag |
Pro 10 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser 175 | - | expression tag |
Gly 176 | - | expression tag |
Arg 177 | - | expression tag |
Leu 178 | - | expression tag |
Val 179 | - | expression tag |
Pro 180 | - | expression tag |
Arg 181 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 169314.2 | |
Branched | Number of molecules | 5 |
Total formula weight | 2669.4 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 663.6 | |
All* | Total formula weight | 172647.3 |