4XQU
Crystal structure of hemagglutinin from Jiangxi-Donghu (2013) H10N8 influenza virus in complex with 3'-SLN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-07-17 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.0716 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 64.874, 245.853, 70.995 |
Unit cell angles | 90.00, 112.46, 90.00 |
Refinement procedure
Resolution | 48.386 - 3.250 |
R-factor | 0.2193 |
Rwork | 0.217 |
R-free | 0.26120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4xq5 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.310 |
High resolution limit [Å] | 3.250 | 8.810 | 3.250 |
Rmerge | 0.146 | 0.056 | 0.569 |
Rmeas | 0.180 | 0.069 | 0.727 |
Rpim | 0.102 | 0.039 | 0.448 |
Total number of observations | 86794 | ||
Number of reflections | 31215 | ||
<I/σ(I)> | 5 | ||
Completeness [%] | 95.9 | 95.3 | 91.7 |
Redundancy | 2.8 | 2.9 | 2.1 |
CC(1/2) | 0.995 | 0.650 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 277.15 | 0.2 M NaSCN, 20% (w/v) PEG 3350 |