4XGO
Crystal structure of leucine-rich repeat domain of APL1B
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Anopheles Plasmodium-responsive Leucine-rich repeat protein 1B | polymer | 356 | 41093.8 | 2 | UniProt (F2YBL9) Pfam (PF13855) | Anopheles gambiae (African malaria mosquito) | APL1B |
| 2 | C, D (C, D) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 3 | E, O, P (A, B) | PHOSPHATE ION | non-polymer | 95.0 | 3 | Chemie (PO4) | |||
| 4 | F, N (A, B) | ACETATE ION | non-polymer | 59.0 | 2 | Chemie (ACT) | |||
| 5 | G, H, I, J, K... (A) | GLYCEROL | non-polymer | 92.1 | 6 | Chemie (GOL) | |||
| 6 | M, Q (A, B) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 7 | R (B) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 8 | S, T (A, B) | water | water | 18.0 | 772 | Chemie (HOH) |
Sequence modifications
A, B: 21 - 370 (UniProt: F2YBL9)
| PDB | External Database | Details |
|---|---|---|
| Met 120 | Leu 120 | conflict |
| Ala 176 | Val 176 | conflict |
| Val 225 | Thr 225 | conflict |
| Lys 236 | Ile 236 | conflict |
| Tyr 239 | Ile 239 | conflict |
| Gln 240 | His 240 | conflict |
| Lys 244 | Thr 244 | conflict |
| Met 245 | Ile 245 | conflict |
| His 371 | - | expression tag |
| His 372 | - | expression tag |
| His 373 | - | expression tag |
| His 374 | - | expression tag |
| His 375 | - | expression tag |
| His 376 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 82187.5 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 848.8 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 1049.5 | |
| All* | Total formula weight | 84085.8 |
