4XCZ
X-ray structure of the N-formyltransferase QdtF from Providencia alcalifaciens in complex with TDP-Qui3n and N5-THF
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | TDP-3-aminoquinovose-N-formyltransferase | polymer | 417 | 48163.8 | 1 | UniProt (F8RC03) Pfam (PF00551) Pfam (PF12796) In PDB | Providencia alcalifaciens | |
2 | A | N-{[4-({[(6R)-2-amino-5-formyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-glutamic acid | non-polymer | 473.4 | 1 | Chemie (FON) | |||
3 | A | [(3R,4S,5S,6R)-4-amino-3,5-dihydroxy-6-methyloxan-2-yl][hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] hydrogen phosphate | non-polymer | 547.3 | 2 | Chemie (T3Q) | |||
4 | A | SODIUM ION | non-polymer | 23.0 | 5 | Chemie (NA) | |||
5 | A | POTASSIUM ION | non-polymer | 39.1 | 1 | Chemie (K) | |||
6 | A | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
7 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 5 | Chemie (EDO) | |||
8 | water | water | 18.0 | 544 | Chemie (HOH) |
Sequence modifications
A: 1 - 397 (UniProt: F8RC03)
PDB | External Database | Details |
---|---|---|
Met -19 | - | expression tag |
Gly -18 | - | expression tag |
Ser -17 | - | expression tag |
Ser -16 | - | expression tag |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
Ser -9 | - | expression tag |
Ser -8 | - | expression tag |
Glu -7 | - | expression tag |
Asn -6 | - | expression tag |
Leu -5 | - | expression tag |
Tyr -4 | - | expression tag |
Phe -3 | - | expression tag |
Gln -2 | - | expression tag |
Gly -1 | - | expression tag |
Ala 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 48163.8 | |
Non-Polymers* | Number of molecules | 15 |
Total formula weight | 2068.0 | |
All* | Total formula weight | 50231.7 |