4X0Y
JC polyomavirus VP1 from a genotype 3 strain
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E (A, B, C, D, E) | Major capsid protein | polymer | 272 | 30033.8 | 5 | UniProt (P90498) Pfam (PF00718) | JC polyomavirus type 3 (JCPyV) | VP1,VP1 capsid protein |
| 2 | F, GA, N, T, Z (A, E, B, C, D) | GLYCEROL | non-polymer | 92.1 | 5 | Chemie (GOL) | |||
| 3 | AA, BA, DA, EA, FA... (D, E, A, B, C) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 19 | Chemie (EDO) | |||
| 4 | CA, HA, K, Q, V (D, E, A, B, C) | POTASSIUM ION | non-polymer | 39.1 | 5 | Chemie (K) | |||
| 5 | IA, JA, KA, LA, MA (A, B, C, D, E) | water | water | 18.0 | 1274 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E: 22 - 289 (UniProt: P90498)
| PDB | External Database | Details |
|---|---|---|
| Gly 18 | - | expression tag |
| Ser 19 | - | expression tag |
| His 20 | - | expression tag |
| Met 21 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 150169.0 | |
| Non-Polymers* | Number of molecules | 29 |
| Total formula weight | 1835.3 | |
| All* | Total formula weight | 152004.2 |
