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4WZV

Crystal structure of a hydroxamate based inhibitor EN140 in complex with the MMP-9 catalytic domain

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Matrix metalloproteinase-9,Matrix metalloproteinase-9polymer16017904.92UniProt (P14780)
Pfam (PF00413)
Homo sapiens (Human)MMP-9,92 kDa gelatinase,92 kDa type IV collagenase,Gelatinase B,GELB,MMP-9,92 kDa gelatinase,92 kDa type IV collagenase,Gelatinase B,GELB
2C, N
(A, B)
(2R)-4-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-N-hydroxy-2-{[(4'-methoxybiphenyl-4-yl)sulfonyl](propan-2-yloxy)amino}butanamidenon-polymer567.62Chemie (E40)Homo sapiens
3D, E, O, P
(A, B)
ZINC IONnon-polymer65.44Chemie (ZN)
4F, G, H, Q, R...
(A, B)
CALCIUM IONnon-polymer40.16Chemie (CA)
5I, T
(A, B)
1,2-ETHANEDIOLnon-polymer62.12Chemie (EDO)
6J, K
(A)
S-1,2-PROPANEDIOLnon-polymer76.12Chemie (PGO)
7DA, EA, L, M
(B, A)
DI(HYDROXYETHYL)ETHERnon-polymer106.14Chemie (PEG)
8U
(B)
AZIDE IONnon-polymer42.01Chemie (AZI)
9AA, BA, V, W, X...
(B)
SODIUM IONnon-polymer23.07Chemie (NA)
10CA
(B)
GLYCEROLnon-polymer92.11Chemie (GOL)
11FA, GA
(A, B)
waterwater18.0630Chemie (HOH)
Sequence modifications
A, B: 110 - 216 (UniProt: P14780)
A, B: 217 - 269 (UniProt: P14780)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight35809.7
Non-Polymers*Number of molecules29
Total formula weight2633.2
All*Total formula weight38442.9
*Water molecules are not included.

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PDB entries from 2025-11-05

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