4WKP
Crystal structure of Helicobacter pylori 5'-methylthioadenosine/S-adenosyl homocysteine nucleosidase (MTAN) complexed with 2-(2-hydroxyethoxy)ethylthiomethyl-DADMe-Immucillin-A
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Aminodeoxyfutalosine nucleosidase | polymer | 245 | 26886.9 | 4 | UniProt (Q9ZMY2) Pfam (PF01048) | Helicobacter pylori | Aminofutalosine nucleosidase,5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase,MTAN,6-amino-6-deoxyfutalosine N-ribosylhydrolase |
| 2 | E, G, I, J (A, B, C, D) | (3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-(2-{[2-(2-hydroxyethoxy)ethyl]sulfanyl}ethyl)pyrrolidin-3-ol | non-polymer | 381.5 | 4 | Chemie (3QA) | |||
| 3 | F, H (A, B) | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
| 4 | K, L, M, N (A, B, C, D) | water | water | 18.0 | 661 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 2 - 230 (UniProt: Q9ZMY2)
| PDB | External Database | Details |
|---|---|---|
| Met -14 | - | initiating methionine |
| Gly -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| His -9 | - | expression tag |
| His -8 | - | expression tag |
| His -7 | - | expression tag |
| Glu -6 | - | expression tag |
| Asn -5 | - | expression tag |
| Leu -4 | - | expression tag |
| Tyr -3 | - | expression tag |
| Phe -2 | - | expression tag |
| Gln -1 | - | expression tag |
| Gly 0 | - | expression tag |
| Val 1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 107547.5 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 1718.1 | |
| All* | Total formula weight | 109265.6 |






