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4WK0

Metal Ion and Ligand Binding of Integrin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AIntegrin alpha-5polymer45248116.91UniProt (P08648)
Pfam (PF01839)
In PDB
Homo sapiens (Human)CD49 antigen-like family member E,Fibronectin receptor subunit alpha,Integrin alpha-F,VLA-5
2BIntegrin beta-1polymer44549502.91UniProt (P05556)
Pfam (PF17205)
Pfam (PF00362)
In PDB
Homo sapiens (Human)Fibronectin receptor subunit beta,Glycoprotein IIa,GPIIA,VLA-4 subunit beta
3CARG-GLY-ASPpolymer3347.31Homo sapiens
4Dalpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched1073.01In PDB
GlyTouCan (G09724ZC)
5E, F, G, H2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.44In PDB
GlyTouCan (G42666HT)
6A, BCALCIUM IONnon-polymer40.16Chemie (CA)
7A, B2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.24Chemie (NAG)
8BMAGNESIUM IONnon-polymer24.31Chemie (MG)
9waterwater18.0629Chemie (HOH)
Sequence modifications
A: 1 - 452 (UniProt: P08648)
PDBExternal DatabaseDetails
Val 451Ile 492engineered mutation
B: 1 - 445 (UniProt: P05556)
PDBExternal DatabaseDetails
Thr 195Ser 215conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight97967.1
BranchedNumber of molecules5
Total formula weight2770.6
Non-Polymers*Number of molecules11
Total formula weight1149.6
All*Total formula weight101887.2
*Water molecules are not included.

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PDB entries from 2024-09-18

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