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4W5V

Crystal structure of Human SUMO E2-conjugating enzyme (Ubc9) in complex with E1-activating enzyme (Uba2) ubiquitin fold domain (Ufd)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
SUMO-conjugating enzyme UBC9polymer16318442.31UniProt (P63279)
Pfam (PF00179)
Homo sapiens (Human)SUMO-protein ligase,Ubiquitin carrier protein 9,Ubiquitin carrier protein I,Ubiquitin-conjugating enzyme E2 I,Ubiquitin-protein ligase I,p18
2B
(B)
SUMO-activating enzyme subunit 2polymer12213358.01UniProt (Q9UBT2)
Pfam (PF14732)
Homo sapiens (Human)Anthracycline-associated resistance ARX,Ubiquitin-like 1-activating enzyme E1B,Ubiquitin-like modifier-activating enzyme 2
3C
(A)
FORMIC ACIDnon-polymer46.01Chemie (FMT)
4D
(B)
GLYCEROLnon-polymer92.11Chemie (GOL)
5E
(B)
POTASSIUM IONnon-polymer39.11Chemie (K)
6F, G
(A, B)
waterwater18.074Chemie (HOH)
Sequence modifications
A: 1 - 158 (UniProt: P63279)
PDBExternal DatabaseDetails
Gly -4-expression tag
Pro -3-expression tag
Leu -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
B: 445 - 561 (UniProt: Q9UBT2)
PDBExternal DatabaseDetails
Gly 440-expression tag
Pro 441-expression tag
Leu 442-expression tag
Gly 443-expression tag
Ser 444-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight31800.2
Non-Polymers*Number of molecules3
Total formula weight177.2
All*Total formula weight31977.5
*Water molecules are not included.

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PDB entries from 2026-01-14

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