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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

4V8P

T.thermophila 60S ribosomal subunit in complex with initiation factor 6.

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A1, D1, F1, H126S RRNApolymer33541084310.34GenBank (JN547815)TETRAHYMENA THERMOPHILA
2AA, DA, FA, HARIBOSOMAL PROTEIN L37polymer9410703.64UniProt (P0DJ24)
Pfam (PF01907)
In PDB		TETRAHYMENA THERMOPHILARPL37
3AB, DB, FB, HBRPL39polymer526607.84UniProt (P0DJ61)
Pfam (PF00832)
In PDB		TETRAHYMENA THERMOPHILA
4AC, DC, FC, HC60S RIBOSOMAL PROTEIN L36Apolymer10912786.34UniProt (Q22X38)
Pfam (PF00935)
In PDB		TETRAHYMENA THERMOPHILA60S RIBOSOMAL PROTEIN L44
5AE, DE, FE, HERPL6polymer19121777.34UniProt (P0DJ56)
Pfam (PF01159)
In PDB		TETRAHYMENA THERMOPHILA
6AF, DF, FF, HFRPL14polymer12614629.54UniProt (Q24C27)
Pfam (PF00467)
Pfam (PF01929)
In PDB		TETRAHYMENA THERMOPHILA
7AG, DG, FG, HGRPL30polymer10411368.24UniProt (P0DJ59)
Pfam (PF01248)
In PDB		TETRAHYMENA THERMOPHILA
8AH, DH, FH, HHRPL35Apolymer11312650.64UniProt (P0DJ22)
Pfam (PF01247)
In PDB		TETRAHYMENA THERMOPHILA
9AJ, DJ, FJ, HJTRANSLATION INITIATION FACTOR EIF-6, PUTATIVE FAMILY PROTEINpolymer24827188.84UniProt (Q245F2)
Pfam (PF01912)
In PDB		TETRAHYMENA THERMOPHILAEIF6
10AK, DK, FK, HKUBIQUITIN-60S RIBOSOMAL PROTEIN L40polymer12914599.14UniProt (P0DJ25)
Pfam (PF00240)
Pfam (PF01020)
In PDB		TETRAHYMENA THERMOPHILAUBIQUITIN, 60S RIBOSOMAL PROTEIN L40, CEP52, CEP53 RPL40
11AL, DL, FL, HLRPL34polymer12314071.74UniProt (P0DJ23)
Pfam (PF01199)
In PDB		TETRAHYMENA THERMOPHILA
12AM, DM, FM, HMRIBOSOMAL PROTEIN L22polymer11813804.04UniProt (Q23BV5)
Pfam (PF01776)
In PDB		TETRAHYMENA THERMOPHILARPL22
13AN, DN, FN, HNRPL27polymer14416767.94UniProt (P0DJ19)
Pfam (PF01777)
In PDB		TETRAHYMENA THERMOPHILA
14AO, DO, FO, HORPL28polymer13414695.14UniProt (P0DJ20)
Pfam (PF01778)
In PDB		TETRAHYMENA THERMOPHILA
15AP, DP, FP, HPRPL38polymer8910219.34UniProt (Q22SV3)
Pfam (PF01781)
In PDB		TETRAHYMENA THERMOPHILA
16AQ, DQ, FQ, HQ60S RIBOSOMAL PROTEIN L36polymer10411703.14UniProt (Q24F59)
Pfam (PF01158)
In PDB		TETRAHYMENA THERMOPHILARPL36
17AT, DT, FT, HTRPL29polymer667742.14UniProt (P0DJ21)
Pfam (PF01779)
In PDB		TETRAHYMENA THERMOPHILA
18AU, DU, FU, HURPL13polymer20623390.34UniProt (P0DJ58)
Pfam (PF01294)
In PDB		TETRAHYMENA THERMOPHILA
19AX, DX, FX, HXRPL18Apolymer18922018.84UniProt (P0DJ18)
Pfam (PF01775)
In PDB		TETRAHYMENA THERMOPHILA
20B2, C2, E2, G25.8S RRNApolymer15449800.64GenBank (JN547815)TETRAHYMENA THERMOPHILA
21B3, C3, E3, G35S RRNApolymer12038741.04GenBank (J01893)TETRAHYMENA THERMOPHILA
22BA, CA, EA, GARPL8polymer26428707.04UniProt (P0DJ52)
Pfam (PF00181)
Pfam (PF03947)
In PDB		TETRAHYMENA THERMOPHILA
23BB, CB, EB, GBRIBOSOMAL PROTEIN L3polymer39144348.54UniProt (O96774)
Pfam (PF00297)
In PDB		TETRAHYMENA THERMOPHILARPL3
24BC, CC, EC, GCRPL4polymer41045190.84UniProt (P0DJ55)
Pfam (PF00573)
Pfam (PF14374)
In PDB		TETRAHYMENA THERMOPHILA
25BD, CD, ED, GD60S RIBOSOMAL PROTEIN L11polymer17219755.04UniProt (P24119)
Pfam (PF00281)
Pfam (PF00673)
In PDB		TETRAHYMENA THERMOPHILAL21, RPL11
26BE, CE, EE, GE60S RIBOSOMAL PROTEIN L9polymer18821373.04UniProt (Q22AX5)
Pfam (PF00347)
In PDB		TETRAHYMENA THERMOPHILARPL9
27BF, CF, EF, GFRPL7Apolymer25529129.44UniProt (P0DJ14)
Pfam (PF01248)
In PDB		TETRAHYMENA THERMOPHILA
28BG, CG, EG, GGRPLP0polymer12310485.94TETRAHYMENA THERMOPHILA
29BH, CH, EH, GH60S RIBOSOMAL PROTEIN L10polymer21524511.84UniProt (Q235M8)
Pfam (PF00252)
In PDB		TETRAHYMENA THERMOPHILARPL10
30BI, CI, EI, GI60S RIBOSOMAL PROTEIN L13Apolymer19822641.84UniProt (P0DJ15)
Pfam (PF00572)
In PDB		TETRAHYMENA THERMOPHILARPL13A
31BJ, CJ, EJ, GJRPL23polymer14114903.54UniProt (P0DJ53)
Pfam (PF00238)
In PDB		TETRAHYMENA THERMOPHILA
32BK, CK, EK, GK60S RIBOSOMAL PROTEIN L27Apolymer14916662.94UniProt (Q00454)
Pfam (PF00828)
In PDB		TETRAHYMENA THERMOPHILAL29, RPL27A
33BL, CL, EL, GLRIBOSOMAL PROTEIN L15polymer20424134.24UniProt (Q22A30)
Pfam (PF00827)
In PDB		TETRAHYMENA THERMOPHILARPL15
34BM, CM, EM, GM60S RIBOSOMAL PROTEIN L5polymer30134525.94UniProt (Q231U7)
Pfam (PF17144)
Pfam (PF14204)
In PDB		TETRAHYMENA THERMOPHILARPL5
35BN, CN, EN, GNRPL18polymer18120632.24UniProt (P0DJ17)
Pfam (PF17135)
In PDB		TETRAHYMENA THERMOPHILA
36BO, EO, GORPL19polymer18521429.43UniProt (P0DJ60)
Pfam (PF01280)
In PDB		TETRAHYMENA THERMOPHILA
37BP, CP, EP, GP60S RIBOSOMAL PROTEIN L21polymer15718164.14UniProt (Q23TC8)
Pfam (PF01157)
In PDB		TETRAHYMENA THERMOPHILARPL21
38BQ, CQ, EQ, GQRPL17polymer18320417.74UniProt (P0DJ16)
Pfam (PF00237)
In PDB		TETRAHYMENA THERMOPHILA
39BR, CR, ER, GRRPL23Apolymer15016897.74UniProt (P0DJ57)
Pfam (PF03939)
Pfam (PF00276)
In PDB		TETRAHYMENA THERMOPHILA
40BS, CS, ES, GSRPL26polymer13515421.34UniProt (Q23F79)
Pfam (PF16906)
Pfam (PF00467)
In PDB		TETRAHYMENA THERMOPHILA
41BT, CT, ET, GTRPL24polymer15818104.74UniProt (P0DJ54)
Pfam (PF01246)
In PDB		TETRAHYMENA THERMOPHILA
42BU, CU, EU, GURPL35polymer12414231.14UniProt (P0DJ51)
Pfam (PF00831)
In PDB		TETRAHYMENA THERMOPHILA
43BV, CV, EV, GV60S RIBOSOMAL PROTEIN L7polymer23927670.34UniProt (P0DJ13)
Pfam (PF08079)
Pfam (PF00327)
In PDB		TETRAHYMENA THERMOPHILARPL7
44BW, CW, EW, GW60S RIBOSOMAL PROTEIN L31polymer11112990.14UniProt (Q22DH9)
Pfam (PF01198)
In PDB		TETRAHYMENA THERMOPHILARPL31
45BX, CX, EX, GX60S RIBOSOMAL PROTEIN L32polymer13415347.14UniProt (Q236T0)
Pfam (PF01655)
In PDB		TETRAHYMENA THERMOPHILARPL32
46BY, CY, EY, GYRPL37Apolymer10311375.64UniProt (Q23G98)
Pfam (PF01780)
In PDB		TETRAHYMENA THERMOPHILA
47CORPL19polymer18520387.41UniProt (P0DJ60)
Pfam (PF01280)
In PDB		TETRAHYMENA THERMOPHILA
48F1, A1, FK, H1, C3...MAGNESIUM IONnon-polymer24.3865Chemie (MG)
49AL, HK, FK, HL, FL...ZINC IONnon-polymer65.420Chemie (ZN)
50waterwater18.05190Chemie (HOH)
Sequence modifications
AJ, DJ, FJ, HJ: 1 - 245 (UniProt: Q245F2)
PDBExternal DatabaseDetails
Gly -2-expression tag
Thr -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains184
Total formula weight7953462.7
Non-Polymers*Number of molecules885
Total formula weight22332.0
All*Total formula weight7975794.7
*Water molecules are not included.

218500

PDB entries from 2024-04-17

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