4V6N
Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | AA | 5S ribosomal RNA | polymer | 120 | 38790.1 | 1 | GenBank (33357928) | Escherichia coli | |
| 2 | AB | 23S ribosomal RNA | polymer | 2904 | 941813.6 | 1 | GenBank (33357927) | Escherichia coli | |
| 3 | AC | 50S ribosomal protein L1 | polymer | 234 | 24765.7 | 1 | UniProt (P0A7L0) Pfam (PF00687) In PDB | Sulfolobus acidocaldarius | |
| 4 | AD | 50S ribosomal protein L2 | polymer | 272 | 29792.4 | 1 | UniProt (P60422) Pfam (PF00181) Pfam (PF03947) In PDB | Escherichia coli | |
| 5 | AE | 50S ribosomal protein L3 | polymer | 209 | 22277.5 | 1 | UniProt (P60438) Pfam (PF00297) In PDB | Escherichia coli | |
| 6 | AF | 50S ribosomal protein L4 | polymer | 201 | 22121.6 | 1 | UniProt (P60723) Pfam (PF00573) In PDB | Escherichia coli | |
| 7 | AG | 50S ribosomal protein L5 | polymer | 178 | 20202.4 | 1 | UniProt (P62399) Pfam (PF00281) Pfam (PF00673) In PDB | Escherichia coli | |
| 8 | AH | 50S ribosomal protein L6 | polymer | 176 | 18801.6 | 1 | UniProt (P0AG55) Pfam (PF00347) In PDB | Escherichia coli | |
| 9 | AI | 50S ribosomal protein L9 | polymer | 149 | 15789.0 | 1 | UniProt (P0A7R1) Pfam (PF01281) Pfam (PF03948) In PDB | Escherichia coli | |
| 10 | AJ | 50S ribosomal protein L10 | polymer | 164 | 17605.4 | 1 | UniProt (P0A7J3) Pfam (PF00466) In PDB | Sulfolobus acidocaldarius | |
| 11 | AK | 50S ribosomal protein L11 | polymer | 141 | 14763.2 | 1 | UniProt (P0A7J7) Pfam (PF03946) Pfam (PF00298) In PDB | Escherichia coli | |
| 12 | AL | 50S ribosomal protein L13 | polymer | 142 | 16050.6 | 1 | UniProt (P0AA10) Pfam (PF00572) In PDB | Escherichia coli | |
| 13 | AM | 50S ribosomal protein L14 | polymer | 123 | 13565.1 | 1 | UniProt (P0ADY3) Pfam (PF00238) In PDB | Escherichia coli | |
| 14 | AN | 50S ribosomal protein L15 | polymer | 144 | 15008.5 | 1 | UniProt (P02413) Pfam (PF00828) In PDB | Escherichia coli | |
| 15 | AO | 50S ribosomal protein L16 | polymer | 136 | 15312.3 | 1 | UniProt (P0ADY7) Pfam (PF00252) In PDB | Escherichia coli | |
| 16 | AP | 50S ribosomal protein L17 | polymer | 127 | 14393.7 | 1 | UniProt (P0AG44) Pfam (PF01196) In PDB | Escherichia coli | |
| 17 | AQ | 50S ribosomal protein L18 | polymer | 117 | 12794.7 | 1 | UniProt (P0C018) Pfam (PF00861) In PDB | Escherichia coli | |
| 18 | AR | 50S ribosomal protein L19 | polymer | 114 | 13028.1 | 1 | UniProt (P0A7K6) Pfam (PF01245) In PDB | Escherichia coli | |
| 19 | AS | 50S ribosomal protein L20 | polymer | 117 | 13396.8 | 1 | UniProt (P0A7L3) Pfam (PF00453) In PDB | Escherichia coli | |
| 20 | AT | 50S ribosomal protein L21 | polymer | 103 | 11586.4 | 1 | UniProt (P0AG48) Pfam (PF00829) In PDB | Escherichia coli | |
| 21 | AU | 50S ribosomal protein L22 | polymer | 110 | 12253.4 | 1 | UniProt (P61175) Pfam (PF00237) In PDB | Escherichia coli | |
| 22 | AV | 50S ribosomal protein L23 | polymer | 100 | 11222.2 | 1 | UniProt (P0ADZ0) Pfam (PF00276) In PDB | Escherichia coli | |
| 23 | AW | 50S ribosomal protein L24 | polymer | 103 | 11208.1 | 1 | UniProt (P60624) Pfam (PF00467) Pfam (PF17136) In PDB | Escherichia coli | |
| 24 | AX | 50S ribosomal protein L25 | polymer | 94 | 10713.5 | 1 | UniProt (P68919) Pfam (PF01386) In PDB | Escherichia coli | |
| 25 | AY | 50S ribosomal protein L27 | polymer | 84 | 9015.3 | 1 | UniProt (P0A7L8) Pfam (PF01016) In PDB | Escherichia coli | |
| 26 | AZ | 50S ribosomal protein L28 | polymer | 77 | 8896.4 | 1 | UniProt (P0A7M2) Pfam (PF00830) In PDB | Escherichia coli | |
| 27 | A0 | 50S ribosomal protein L29 | polymer | 63 | 7286.5 | 1 | UniProt (P0A7M6) Pfam (PF00831) In PDB | Escherichia coli | |
| 28 | A1 | 50S ribosomal protein L30 | polymer | 58 | 6423.6 | 1 | UniProt (P0AG51) Pfam (PF00327) In PDB | Escherichia coli | |
| 29 | A2 | 50S ribosomal protein L31 | polymer | 70 | 7887.1 | 1 | UniProt (P0A7M9) Pfam (PF01197) In PDB | Escherichia coli | |
| 30 | A3 | 50S ribosomal protein L32 | polymer | 56 | 6332.2 | 1 | UniProt (P0A7N4) Pfam (PF01783) In PDB | Escherichia coli | |
| 31 | A4 | 50S ribosomal protein L33 | polymer | 54 | 6257.4 | 1 | UniProt (P0A7N9) Pfam (PF00471) In PDB | Escherichia coli | |
| 32 | A5 | 50S ribosomal protein L34 | polymer | 46 | 5397.5 | 1 | UniProt (P0A7P5) Pfam (PF00468) In PDB | Escherichia coli | |
| 33 | A6 | 50S ribosomal protein L35 | polymer | 64 | 7181.8 | 1 | UniProt (P0A7Q1) Pfam (PF01632) In PDB | Escherichia coli | |
| 34 | A7 | 50S ribosomal protein L36 | polymer | 38 | 4377.4 | 1 | UniProt (P0A7Q6) Pfam (PF00444) In PDB | Escherichia coli | |
| 35 | BA | 16S ribosomal RNA | polymer | 1542 | 499874.4 | 1 | GenBank (83754040) | Escherichia coli | |
| 36 | BB | A site tRNA | polymer | 76 | 24642.9 | 1 | Escherichia coli | ||
| 37 | BC | mRNA | polymer | 47 | 15036.8 | 1 | Escherichia coli | ||
| 38 | BD | P site tRNA | polymer | 77 | 24832.9 | 1 | Escherichia coli | ||
| 39 | BE | 30S ribosomal protein S2 | polymer | 240 | 26650.5 | 1 | UniProt (P0A7V0) Pfam (PF00318) In PDB | Escherichia coli | |
| 40 | BF | 30S ribosomal protein S3 | polymer | 232 | 25900.1 | 1 | UniProt (P0A7V3) Pfam (PF07650) Pfam (PF00189) In PDB | Escherichia coli | |
| 41 | BG | 30S ribosomal protein S4 | polymer | 205 | 23383.0 | 1 | UniProt (P0A7V8) Pfam (PF00163) Pfam (PF01479) In PDB | Escherichia coli | |
| 42 | BH | 30S ribosomal protein S5 | polymer | 166 | 17498.2 | 1 | UniProt (P0A7W1) Pfam (PF00333) Pfam (PF03719) In PDB | Escherichia coli | |
| 43 | BI | 30S ribosomal protein S6 | polymer | 135 | 15727.5 | 1 | UniProt (P02358) Pfam (PF01250) In PDB | Escherichia coli | |
| 44 | BJ | 30S ribosomal protein S7 | polymer | 178 | 19924.0 | 1 | UniProt (P02359) Pfam (PF00177) In PDB | Escherichia coli | |
| 45 | BK | 30S ribosomal protein S8 | polymer | 129 | 14015.4 | 1 | UniProt (P0A7W7) Pfam (PF00410) In PDB | Escherichia coli | |
| 46 | BL | 30S ribosomal protein S9 | polymer | 129 | 14755.1 | 1 | UniProt (P0A7X3) Pfam (PF00380) In PDB | Escherichia coli | |
| 47 | BM | 30S ribosomal protein S10 | polymer | 103 | 11755.6 | 1 | UniProt (P0A7R5) Pfam (PF00338) In PDB | Escherichia coli | |
| 48 | BN | 30S ribosomal protein S11 | polymer | 128 | 13739.8 | 1 | UniProt (P0A7R9) Pfam (PF00411) In PDB | Escherichia coli | |
| 49 | BO | 30S ribosomal protein S12 | polymer | 123 | 13637.0 | 1 | UniProt (P0A7S3) Pfam (PF00164) In PDB | Escherichia coli | |
| 50 | BP | 30S ribosomal protein S13 | polymer | 117 | 12997.3 | 1 | UniProt (P0A7S9) Pfam (PF00416) In PDB | Escherichia coli | |
| 51 | BQ | 30S ribosomal protein S14 | polymer | 100 | 11475.4 | 1 | UniProt (P0AG59) Pfam (PF00253) In PDB | Escherichia coli | |
| 52 | BR | 30S ribosomal protein S15 | polymer | 88 | 10188.7 | 1 | UniProt (Q8X9M2) Pfam (PF00312) In PDB | Escherichia coli | |
| 53 | BS | 30S ribosomal protein S16 | polymer | 82 | 9207.6 | 1 | UniProt (P0A7T3) Pfam (PF00886) In PDB | Escherichia coli | |
| 54 | BT | 30S ribosomal protein S17 | polymer | 83 | 9593.3 | 1 | UniProt (P0AG63) Pfam (PF00366) In PDB | Escherichia coli | |
| 55 | BU | 30S ribosomal protein S18 | polymer | 74 | 8874.3 | 1 | UniProt (P0A7T7) Pfam (PF01084) In PDB | Escherichia coli | |
| 56 | BV | 30S ribosomal protein S19 | polymer | 91 | 10324.2 | 1 | UniProt (P0A7U3) Pfam (PF00203) In PDB | Escherichia coli | |
| 57 | BW | 30S ribosomal protein S20 | polymer | 86 | 9577.3 | 1 | UniProt (P0A7U7) Pfam (PF01649) In PDB | Escherichia coli | |
| 58 | BX | 30S ribosomal protein S21 | polymer | 70 | 8392.8 | 1 | UniProt (P68679) Pfam (PF01165) In PDB | Escherichia coli | |
| 59 | AB | N-FORMYLMETHIONINE | non-polymer | 177.2 | 1 | Chemie (FME) | |||
| 60 | BB | TRYPTOPHAN | non-polymer | 204.2 | 1 | Chemie (TRP) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 58 |
| Total formula weight | 2258314.6 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 381.4 | |
| All* | Total formula weight | 2258696.1 |
