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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

4V4Z

70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AA16S rRNApolymer1522493958.31GenBank (155076)Thermus thermophilus
2ACtRNA fMET (unmodified bases)polymer7624496.61Escherichia coli
3ADtRNA PHE (unmodified bases)polymer7624485.51Thermus thermophilus
4A1mRNApolymer278885.51
5AE30S ribosomal protein S2polymer25629317.71UniProt (P80371)
Pfam (PF00318)
In PDB		Thermus thermophilus
6AF30S ribosomal protein S3polymer23926751.11UniProt (P80372)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Thermus thermophilus
7AG30S ribosomal protein S4polymer20924373.41UniProt (P80373)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Thermus thermophilus
8AH30S ribosomal protein S5polymer16217583.41UniProt (P27152)
Pfam (PF00333)
Pfam (PF03719)
UniProt (by SIFTS) (Q5SHQ5)
In PDB		Thermus thermophilus
9AI30S ribosomal protein S6polymer10111988.81UniProt (P23370)
Pfam (PF01250)
UniProt (by SIFTS) (Q5SLP8)
In PDB		Thermus thermophilusTS9
10AJ30S ribosomal protein S7polymer15618051.01UniProt (P17291)
Pfam (PF00177)
In PDB		Thermus thermophilus
11AK30S ribosomal protein S8polymer13815868.61UniProt (P24319)
Pfam (PF00410)
UniProt (by SIFTS) (P0DOY9)
In PDB		Thermus thermophilus
12AL30S ribosomal protein S9polymer12814410.61UniProt (P80374)
Pfam (PF00380)
In PDB		Thermus thermophilus
13AM30S ribosomal protein S10polymer10511955.01UniProt (P80375)
Pfam (PF00338)
UniProt (by SIFTS) (Q5SHN7)
In PDB		Thermus thermophilus
14AN30S ribosomal protein S11polymer12913737.91UniProt (P80376)
Pfam (PF00411)
In PDB		Thermus thermophilus
15AO30S ribosomal protein S12polymer13214637.41UniProt (P17293)
Pfam (PF00164)
UniProt (by SIFTS) (Q5SHN3)
In PDB		Thermus thermophilus
16AP30S ribosomal protein S13polymer12614338.91UniProt (P80377)
Pfam (PF00416)
In PDB		Thermus thermophilus
17AQ30S ribosomal protein S14polymer617158.71UniProt (P24320)
Pfam (PF00253)
UniProt (by SIFTS) (P0DOY6)
In PDB		Thermus thermophilus
18AR30S ribosomal protein S15polymer8910578.41UniProt (P80378)
Pfam (PF00312)
UniProt (by SIFTS) (Q5SJ76)
In PDB		Thermus thermophilus
19AS30S ribosomal protein S16polymer8810410.01UniProt (Q5SJH3)
Pfam (PF00886)
In PDB		Thermus thermophilus
20AT30S ribosomal protein S17polymer10512324.71UniProt (P24321)
Pfam (PF00366)
In PDB		Thermus thermophilus
21AU30S ribosomal protein S18polymer8810244.31UniProt (P80382)
Pfam (PF01084)
In PDB		Thermus thermophilus
22AV30S ribosomal protein S19polymer9310605.51UniProt (P80381)
Pfam (PF00203)
UniProt (by SIFTS) (Q5SHP2)
In PDB		Thermus thermophilus
23AW30S ribosomal protein S20polymer10611736.11UniProt (P80380)
Pfam (PF01649)
In PDB		Thermus thermophilus
24AX30S ribosomal protein Thxpolymer273350.01UniProt (P62612)
Pfam (PF17070)
UniProt (by SIFTS) (Q5SIH3)
In PDB		Thermus thermophilus
25BA23S rRNApolymer2916948280.71GenBank (48268)Thermus thermophilus
26BB5S rRNApolymer12339846.81GenBank (48271)Thermus thermophilus
27BC50S RIBOSOMAL PROTEIN L1polymer22924867.71UniProt (P27150)
Pfam (PF00687)
In PDB		Thermus thermophilus
28BD50S RIBOSOMAL PROTEIN L2polymer27630532.61UniProt (P60405)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Thermus thermophilus
29BE50S RIBOSOMAL PROTEIN L3polymer20622450.21UniProt (P52860)
Pfam (PF00297)
UniProt (by SIFTS) (Q5SHN8)
In PDB		Thermus thermophilus
30BF50S RIBOSOMAL PROTEIN L4polymer21023271.91UniProt (Q5SHN9)
Pfam (PF00573)
In PDB		Thermus thermophilusL1e
31BG50S RIBOSOMAL PROTEIN L5polymer18221061.61UniProt (P41201)
Pfam (PF00281)
Pfam (PF00673)
UniProt (by SIFTS) (Q5SHQ0)
In PDB		Thermus thermophilusTthL5, TL4
32BH50S RIBOSOMAL PROTEIN L6polymer18019568.91UniProt (P24316)
Pfam (PF00347)
UniProt (by SIFTS) (P0DOY8)
In PDB		Thermus thermophilus
33BK50S RIBOSOMAL PROTEIN L9polymer14816422.21UniProt (P27151)
Pfam (PF01281)
Pfam (PF03948)
In PDB		Thermus thermophilus
34BL50S RIBOSOMAL PROTEIN L11polymer14715526.11UniProt (P36238)
Pfam (PF03946)
Pfam (PF00298)
UniProt (by SIFTS) (Q5SLP6)
In PDB		Thermus thermophilus
35BM50S RIBOSOMAL PROTEIN L13polymer14015927.91UniProt (P60488)
Pfam (PF00572)
In PDB		Thermus thermophilus
36BN50S RIBOSOMAL PROTEIN L14polymer12213309.61UniProt (P60558)
Pfam (PF00238)
In PDB		Thermus thermophilus
37BO50S RIBOSOMAL PROTEIN L15polymer15016319.11UniProt (P74910)
Pfam (PF00828)
UniProt (by SIFTS) (Q5SHQ7)
In PDB		Thermus thermophilus
38BP50S RIBOSOMAL PROTEIN L16polymer14115993.91UniProt (P60489)
Pfam (PF00252)
In PDB		Thermus thermophilus
39BQ50S RIBOSOMAL PROTEIN L17polymer11813750.11UniProt (Q9Z9H5)
Pfam (PF01196)
In PDB		Thermus thermophilus
40BR50S RIBOSOMAL PROTEIN L18polymer11212639.81UniProt (P80320)
Pfam (PF00861)
UniProt (by SIFTS) (Q5SHQ4)
In PDB		Thermus thermophilusTL24
41BS50S RIBOSOMAL PROTEIN L19polymer14617188.81UniProt (P60490)
Pfam (PF01245)
In PDB		Thermus thermophilus
42BT50S RIBOSOMAL PROTEIN L20polymer11813779.31UniProt (P60491)
Pfam (PF00453)
In PDB		Thermus thermophilus
43BU50S RIBOSOMAL PROTEIN L21polymer10111069.21UniProt (P60492)
Pfam (PF00829)
In PDB		Thermus thermophilus
44BV50S RIBOSOMAL PROTEIN L22polymer11312808.11UniProt (P48286)
Pfam (PF00237)
UniProt (by SIFTS) (Q5SHP3)
In PDB		Thermus thermophilus
45BW50S RIBOSOMAL PROTEIN L23polymer9610759.81UniProt (Q9RA57)
Pfam (PF00276)
UniProt (by SIFTS) (Q5SHP0)
In PDB		Thermus thermophilusL*23
46BX50S RIBOSOMAL PROTEIN L24polymer11012085.61UniProt (Q56435)
Pfam (PF00467)
Pfam (PF17136)
UniProt (by SIFTS) (Q5SHP9)
In PDB		Thermus thermophilus
47BY50S RIBOSOMAL PROTEIN L25polymer20623238.61UniProt (Q5SHZ1)
Pfam (PF01386)
Pfam (PF14693)
In PDB		Thermus thermophilusTL5
48BZ50S RIBOSOMAL PROTEIN L27polymer859529.11UniProt (P60493)
Pfam (PF01016)
In PDB		Thermus thermophilus
49B150S RIBOSOMAL PROTEIN L29polymer678112.61UniProt (Q9LCY4)
Pfam (PF00831)
In PDB		Thermus thermophilus
50B250S RIBOSOMAL PROTEIN L30polymer606799.11UniProt (P74909)
Pfam (PF00327)
UniProt (by SIFTS) (Q5SHQ6)
In PDB		Thermus thermophilus
51B350S RIBOSOMAL PROTEIN L31polymer718300.51UniProt (Q5SJE1)
Pfam (PF01197)
In PDB		Thermus thermophilus
52B450S RIBOSOMAL PROTEIN L32polymer606722.11UniProt (P80339)
Pfam (PF01783)
In PDB		Thermus thermophilus
53B550S RIBOSOMAL PROTEIN L33polymer546632.91UniProt (P35871)
Pfam (PF00471)
In PDB		Thermus thermophilus
54B650S RIBOSOMAL PROTEIN L34polymer496132.41UniProt (P80340)
Pfam (PF00468)
In PDB		Thermus thermophilus
55B750S RIBOSOMAL PROTEIN L35polymer657506.21UniProt (P80341)
Pfam (PF01632)
UniProt (by SIFTS) (Q5SKU1)
In PDB		Thermus thermophilus
56B850S RIBOSOMAL PROTEIN L36polymer374435.41UniProt (P80256)
Pfam (PF00444)
UniProt (by SIFTS) (Q5SHR2)
In PDB		Thermus thermophilusRibosomal protein B
Sequence modifications
BA: 1 - 2906 (GenBank: 48268)
PDBExternal DatabaseDetails
G 493-INSERTION
BB: 0 - 119 (GenBank: 48271)
PDBExternal DatabaseDetails
A -1-INSERTION
U 120-INSERTION
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains56
Total formula weight2256116.1
All*Total formula weight2256116.1
*Water molecules are not included.

222624

PDB entries from 2024-07-17

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