4UO7
Structure of the A_Canine_Colorado_17864_06 H3 haemagglutinin in complex with 6SO4 Sialyl Lewis X
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E (A, C, E) | HAEMAGGLUTININ HA1 | polymer | 328 | 36346.0 | 3 | UniProt (E0UVR5) Pfam (PF00509) | INFLUENZA A VIRUS (A/CANINE/COLORADO/17864/2006(H3N8)) | |
| 2 | B, D, F (B, D, F) | HAEMAGGLUTININ HA2 | polymer | 175 | 20273.4 | 3 | UniProt (E0UVR5) Pfam (PF00509) | INFLUENZA A VIRUS (A/CANINE/COLORADO/17864/2006(H3N8)) | |
| 3 | G, L, M, O, Q... (G, L, M, O, Q...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 7 | In PDB GlyTouCan (G42666HT) | |||
| 4 | H, J (H, J) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 2 | In PDB GlyTouCan (G15407YE) | |||
| 5 | I, N, S (I, N, S) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 3 | In PDB GlyTouCan (G22768VO) | |||
| 6 | K, P, U (K, P, U) | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-6-O-sulfo-beta-D-glucopyranose | branched | 900.8 | 3 | In PDB GlyTouCan (G80722US) | |||
| 7 | AA, BA, V, W, Y... (D, F, A, B, C) | SULFATE ION | non-polymer | 96.1 | 6 | Chemie (SO4) | |||
| 8 | X (C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 9 | CA, DA, EA, FA, GA... (A, B, C, D, E...) | water | water | 18.0 | 138 | Chemie (HOH) |
Sequence modifications
B, D, F: 1 - 172 (UniProt: E0UVR5)
| PDB | External Database | Details |
|---|---|---|
| Ser 173 | - | expression tag |
| Gly 174 | - | expression tag |
| Arg 175 | - | expression tag |
| Glu 131 | Asp 475 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 169858.1 | |
| Branched | Number of molecules | 15 |
| Total formula weight | 9578.8 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 797.6 | |
| All* | Total formula weight | 180234.4 |
