Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4UG0

STRUCTURE OF THE HUMAN 80S RIBOSOME

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(L5)
28S ribosomal RNApolymer50701640238.11HOMO SAPIENS (HUMAN)RNA (5070-MER)
2B
(L7)
5S ribosomal RNApolymer12138998.11HOMO SAPIENS (HUMAN)RNA (121-MER)
3C
(L8)
5.8S ribosomal RNApolymer15750449.81HOMO SAPIENS (HUMAN)RNA (157-MER)
4D
(LA)
60S RIBOSOMAL PROTEIN L8polymer25728088.91UniProt (P62917)
Pfam (PF00181)
Pfam (PF03947)
HOMO SAPIENS (HUMAN)
5E
(LB)
60S RIBOSOMAL PROTEIN L3polymer40346211.11UniProt (P39023)
Pfam (PF00297)
HOMO SAPIENS (HUMAN)HIV-1 TAR RNA-binding protein B,TARBP-B
6F
(LC)
60S RIBOSOMAL PROTEIN L4polymer42747804.61UniProt (P36578)
Pfam (PF00573)
Pfam (PF14374)
HOMO SAPIENS (HUMAN)60S ribosomal protein L1
7G
(LD)
60S RIBOSOMAL PROTEIN L5polymer29734426.81UniProt (P46777)
Pfam (PF17144)
Pfam (PF14204)
HOMO SAPIENS (HUMAN)
8H
(LE)
60S RIBOSOMAL PROTEIN L6polymer28832810.21UniProt (Q02878)
Pfam (PF03868)
Pfam (PF01159)
HOMO SAPIENS (HUMAN)Neoplasm-related protein C140,Tax-responsive enhancer element-binding protein 107,TaxREB107
9I
(LF)
60S RIBOSOMAL PROTEIN L7polymer24829291.01UniProt (P18124)
Pfam (PF08079)
Pfam (PF00327)
HOMO SAPIENS (HUMAN)
10J
(LG)
60S RIBOSOMAL PROTEIN L7Apolymer26630061.81UniProt (P62424)
Pfam (PF01248)
HOMO SAPIENS (HUMAN)PLA-X polypeptide,Surfeit locus protein 3
11K
(LH)
60S RIBOSOMAL PROTEIN L9polymer19221899.51UniProt (P32969)
Pfam (PF00347)
HOMO SAPIENS (HUMAN)
12L
(LI)
60S RIBOSOMAL PROTEIN L10-LIKEpolymer21424570.91UniProt (Q96L21)
Pfam (PF00252)
HOMO SAPIENS (HUMAN)
13M
(LJ)
60S RIBOSOMAL PROTEIN L11polymer17820288.51UniProt (P62913)
Pfam (PF00281)
Pfam (PF00673)
HOMO SAPIENS (HUMAN)CLL-associated antigen KW-12
14N
(LL)
60S RIBOSOMAL PROTEIN L13polymer21124321.71UniProt (P26373)
Pfam (PF01294)
HOMO SAPIENS (HUMAN)Breast basic conserved protein 1
15O
(LM)
60S RIBOSOMAL PROTEIN L14polymer21523485.01UniProt (P50914)
Pfam (PF01929)
HOMO SAPIENS (HUMAN)CAG-ISL 7
16P
(LN)
60S RIBOSOMAL PROTEIN L15polymer20424207.31UniProt (P61313)
Pfam (PF00827)
HOMO SAPIENS (HUMAN)
17Q
(LO)
60S RIBOSOMAL PROTEIN L13Apolymer20323633.41UniProt (P40429)
Pfam (PF00572)
HOMO SAPIENS (HUMAN)23 kDa highly basic protein
18R
(LP)
60S RIBOSOMAL PROTEIN L17polymer18421443.21UniProt (P18621)
Pfam (PF00237)
HOMO SAPIENS (HUMAN)60S ribosomal protein L23,PD-1
19S
(LQ)
60S RIBOSOMAL PROTEIN L18polymer18821687.71UniProt (Q07020)
Pfam (PF17135)
HOMO SAPIENS (HUMAN)
20T
(LR)
60S RIBOSOMAL PROTEIN L19polymer19623535.31UniProt (P84098)
Pfam (PF01280)
HOMO SAPIENS (HUMAN)
21U
(LS)
60S RIBOSOMAL PROTEIN L18Apolymer17620808.51UniProt (Q02543)
Pfam (PF01775)
HOMO SAPIENS (HUMAN)
22V
(LT)
60S RIBOSOMAL PROTEIN L21polymer16018610.01UniProt (P46778)
Pfam (PF01157)
HOMO SAPIENS (HUMAN)
23W
(LU)
60S RIBOSOMAL PROTEIN L22polymer12814813.01UniProt (P35268)
Pfam (PF01776)
HOMO SAPIENS (HUMAN)EBER-associated protein,EAP,Epstein-Barr virus small RNA-associated protein,Heparin-binding protein HBp15
24X
(LV)
60S RIBOSOMAL PROTEIN L23polymer14014892.51UniProt (P62829)
Pfam (PF00238)
HOMO SAPIENS (HUMAN)60S ribosomal protein L17
25Y
(LW)
60S RIBOSOMAL PROTEIN L24polymer15717825.11UniProt (P83731)
Pfam (PF01246)
HOMO SAPIENS (HUMAN)60S ribosomal protein L30
26Z
(LX)
60S RIBOSOMAL PROTEIN L23Apolymer15617740.21UniProt (P62750)
Pfam (PF03939)
Pfam (PF00276)
HOMO SAPIENS (HUMAN)
27AA
(LY)
60S RIBOSOMAL PROTEIN L26polymer14517303.41UniProt (P61254)
Pfam (PF16906)
Pfam (PF00467)
HOMO SAPIENS (HUMAN)
28BA
(LZ)
60S RIBOSOMAL PROTEIN L27polymer13615835.81UniProt (P61353)
Pfam (PF00467)
Pfam (PF01777)
HOMO SAPIENS (HUMAN)
29CA
(La)
60S RIBOSOMAL PROTEIN L27Apolymer14816604.51UniProt (P46776)
Pfam (PF00828)
HOMO SAPIENS (HUMAN)
30DA
(Lb)
60S RIBOSOMAL PROTEIN L29polymer15917804.31UniProt (P47914)
Pfam (PF01779)
HOMO SAPIENS (HUMAN)Cell surface heparin-binding protein HIP
31EA
(Lc)
60S RIBOSOMAL PROTEIN L30polymer11512805.11UniProt (P62888)
Pfam (PF01248)
HOMO SAPIENS (HUMAN)
32FA
(Ld)
60S RIBOSOMAL PROTEIN L31polymer12514494.91UniProt (P62899)
Pfam (PF01198)
HOMO SAPIENS (HUMAN)
33GA
(Le)
60S RIBOSOMAL PROTEIN L32polymer13515898.91UniProt (P62910)
Pfam (PF01655)
HOMO SAPIENS (HUMAN)
34HA
(Lf)
60S RIBOSOMAL PROTEIN L35Apolymer11012564.71UniProt (P18077)
Pfam (PF01247)
HOMO SAPIENS (HUMAN)Cell growth-inhibiting gene 33 protein
35IA
(Lg)
60S RIBOSOMAL PROTEIN L34polymer11713326.11UniProt (P49207)
Pfam (PF01199)
HOMO SAPIENS (HUMAN)
36JA
(Lh)
60S RIBOSOMAL PROTEIN L35polymer12314593.61UniProt (P42766)
Pfam (PF00831)
HOMO SAPIENS (HUMAN)
37KA
(Li)
60S RIBOSOMAL PROTEIN L36polymer10512290.91UniProt (Q9Y3U8)
Pfam (PF01158)
HOMO SAPIENS (HUMAN)
38LA
(Lj)
60S RIBOSOMAL PROTEIN L37polymer9711111.01UniProt (P61927)
Pfam (PF01907)
HOMO SAPIENS (HUMAN)G1.16
39MA
(Lk)
60S RIBOSOMAL PROTEIN L38polymer708238.91UniProt (P63173)
Pfam (PF01781)
HOMO SAPIENS (HUMAN)
40NA
(Ll)
60S RIBOSOMAL PROTEIN L39polymer516426.81UniProt (P62891)
Pfam (PF00832)
HOMO SAPIENS (HUMAN)
41OA
(Lm)
UBIQUITIN-60S RIBOSOMAL PROTEIN L40polymer12814758.41UniProt (P62987)
Pfam (PF00240)
Pfam (PF01020)
HOMO SAPIENS (HUMAN)CEP52,Ubiquitin A-52 residue ribosomal protein fusion product 1
42PA
(Ln)
60S RIBOSOMAL PROTEIN L41polymer253473.51UniProt (P62945)
Pfam (PF05162)
HOMO SAPIENS (HUMAN)HG12
43QA
(Lo)
60S RIBOSOMAL PROTEIN L36Apolymer10612477.01UniProt (P83881)
Pfam (PF00935)
HOMO SAPIENS (HUMAN)60S ribosomal protein L44,Cell growth-inhibiting gene 15 protein,Cell migration-inducing gene 6 protein
44RA
(Lp)
60S RIBOSOMAL PROTEIN L37Apolymer9210299.41UniProt (P61513)
Pfam (PF01780)
HOMO SAPIENS (HUMAN)
45SA
(Lr)
60S RIBOSOMAL PROTEIN L28polymer13715784.61UniProt (P46779)
Pfam (PF01778)
HOMO SAPIENS (HUMAN)
46TA
(Lz)
60S RIBOSOMAL PROTEIN L10Apolymer21724879.41UniProt (P62906)
Pfam (PF00687)
HOMO SAPIENS (HUMAN)CSA-19,Neural precursor cell expressed developmentally down-regulated protein 6,NEDD-6
47UA
(S2)
18S ribosomal RNApolymer1869602752.91HOMO SAPIENS (HUMAN)RNA (1869-MER)
48VA
(S6)
HUMAN INITIATOR MET-TRNA-Ipolymer7524231.51GenBank (174924)HOMO SAPIENS (HUMAN)
49WA
(SA)
40S RIBOSOMAL PROTEIN SApolymer29532883.91UniProt (P08865)
Pfam (PF00318)
Pfam (PF16122)
HOMO SAPIENS (HUMAN)37 kDa laminin receptor precursor,37LRP,37/67 kDa laminin receptor,LRP/LR,67 kDa laminin receptor,67LR,Colon carcinoma laminin-binding protein,Laminin receptor 1,LamR,Laminin-binding protein precursor p40,LBP/p40,Multidrug resistance-associated protein MGr1-Ag,NEM/1CHD4
50XA
(SB)
40S RIBOSOMAL PROTEIN S3Apolymer26430002.11UniProt (P61247)
Pfam (PF01015)
HOMO SAPIENS (HUMAN)v-fos transformation effector protein,Fte-1
51YA
(SD)
40S RIBOSOMAL PROTEIN S3polymer24326729.41UniProt (P23396)
Pfam (PF07650)
Pfam (PF00189)
HOMO SAPIENS (HUMAN)
52ZA
(SE)
40S RIBOSOMAL PROTEIN S4, X ISOFORMpolymer26329654.91UniProt (P62701)
Pfam (PF08071)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)
HOMO SAPIENS (HUMAN)SCR10,Single copy abundant mRNA protein
53AB
(SF)
40S RIBOSOMAL PROTEIN S5polymer20422913.51UniProt (P46782)
Pfam (PF00177)
HOMO SAPIENS (HUMAN)
54BB
(SH)
40S RIBOSOMAL PROTEIN S7polymer19422168.91UniProt (P62081)
Pfam (PF01251)
HOMO SAPIENS (HUMAN)
55CB
(SI)
40S RIBOSOMAL PROTEIN S8polymer20824263.41UniProt (P62241)
Pfam (PF01201)
HOMO SAPIENS (HUMAN)
56DB
(SK)
40S RIBOSOMAL PROTEIN S10polymer16518933.81UniProt (P46783)
Pfam (PF03501)
HOMO SAPIENS (HUMAN)
57EB
(SL)
40S RIBOSOMAL PROTEIN S11polymer15818468.81UniProt (P62280)
Pfam (PF16205)
Pfam (PF00366)
HOMO SAPIENS (HUMAN)
58FB
(SP)
40S RIBOSOMAL PROTEIN S15polymer14517076.21UniProt (P62841)
Pfam (PF00203)
HOMO SAPIENS (HUMAN)RIG protein
59GB
(SQ)
40S RIBOSOMAL PROTEIN S16polymer14616477.41UniProt (P62249)
Pfam (PF00380)
HOMO SAPIENS (HUMAN)
60HB
(SR)
40S RIBOSOMAL PROTEIN S17-LIKEpolymer13515578.21UniProt (P0CW22)
Pfam (PF00833)
UniProt (by SIFTS) (P08708)
HOMO SAPIENS (HUMAN)
61IB
(SS)
40S RIBOSOMAL PROTEIN S18polymer15217759.81UniProt (P62269)
Pfam (PF00416)
HOMO SAPIENS (HUMAN)Ke-3,Ke3
62JB
(ST)
40S RIBOSOMAL PROTEIN S19polymer14516091.61UniProt (P39019)
Pfam (PF01090)
HOMO SAPIENS (HUMAN)
63KB
(SU)
40S RIBOSOMAL PROTEIN S20polymer11913398.81UniProt (P60866)
Pfam (PF00338)
HOMO SAPIENS (HUMAN)
64LB
(SV)
40S RIBOSOMAL PROTEIN S21polymer839124.41UniProt (P63220)
Pfam (PF01249)
HOMO SAPIENS (HUMAN)
65MB
(SX)
40S RIBOSOMAL PROTEIN S23polymer14315844.71UniProt (P62266)
Pfam (PF00164)
HOMO SAPIENS (HUMAN)
66NB
(Sa)
40S RIBOSOMAL PROTEIN S26polymer11513047.51UniProt (P62854)
Pfam (PF01283)
HOMO SAPIENS (HUMAN)
67OB
(Sc)
40S RIBOSOMAL PROTEIN S28polymer697855.11UniProt (P62857)
Pfam (PF01200)
HOMO SAPIENS (HUMAN)
68PB
(Sd)
40S RIBOSOMAL PROTEIN S29polymer566690.81UniProt (P62273)
Pfam (PF00253)
HOMO SAPIENS (HUMAN)
69QB
(Sf)
UBIQUITIN-40S RIBOSOMAL PROTEIN S27Apolymer15618004.01UniProt (P62979)
Pfam (PF00240)
Pfam (PF01599)
HOMO SAPIENS (HUMAN)Ubiquitin carboxyl extension protein 80
70RB
(Sg)
GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT BETA-2-LIKE 1polymer31735115.71UniProt (P63244)
Pfam (PF00400)
HOMO SAPIENS (HUMAN)Cell proliferation-inducing gene 21 protein,Guanine nucleotide-binding protein subunit beta-like protein 12.3,Human lung cancer oncogene 7 protein,HLC-7,Receptor for activated C kinase,Receptor of activated protein kinase C 1,RACK1
71SB
(SC)
40S RIBOSOMAL PROTEIN S2polymer29331376.51UniProt (P15880)
Pfam (PF00333)
Pfam (PF03719)
HOMO SAPIENS (HUMAN)40S ribosomal protein S4,Protein LLRep3
72TB
(SG)
40S RIBOSOMAL PROTEIN S6polymer24928751.91UniProt (P62753)
Pfam (PF01092)
HOMO SAPIENS (HUMAN)Phosphoprotein NP33
73UB
(SJ)
40S RIBOSOMAL PROTEIN S9polymer19422641.61UniProt (P46781)
Pfam (PF00163)
Pfam (PF01479)
HOMO SAPIENS (HUMAN)
74VB
(SM)
40S RIBOSOMAL PROTEINpolymer13214548.91HOMO SAPIENS (HUMAN)
75WB
(SN)
40S RIBOSOMAL PROTEIN S13polymer15117259.41UniProt (P62277)
Pfam (PF08069)
Pfam (PF00312)
HOMO SAPIENS (HUMAN)
76XB
(SO)
40S RIBOSOMAL PROTEIN S14polymer15116302.81UniProt (P62263)
Pfam (PF00411)
HOMO SAPIENS (HUMAN)
77YB
(SW)
40S RIBOSOMAL PROTEIN S15Apolymer13014865.61UniProt (P62244)
Pfam (PF00410)
HOMO SAPIENS (HUMAN)
78ZB
(SY)
40S RIBOSOMAL PROTEIN S24polymer13315463.31UniProt (P62847)
Pfam (PF01282)
HOMO SAPIENS (HUMAN)
79AC
(SZ)
40S RIBOSOMAL PROTEIN S25polymer12513776.21UniProt (P62851)
Pfam (PF03297)
HOMO SAPIENS (HUMAN)
80BC
(Sb)
40S RIBOSOMAL PROTEIN S27polymer849480.21UniProt (P42677)
Pfam (PF01667)
HOMO SAPIENS (HUMAN)Metallopan-stimulin 1,MPS-1
81CC
(Se)
40S RIBOSOMAL PROTEIN S30polymer596668.91UniProt (P62861)
Pfam (PF04758)
HOMO SAPIENS (HUMAN)
82AD, AE, AF, AG, AH...
(L5, L7, S2, L8, LA...)
MAGNESIUM IONnon-polymer24.3239Chemie (MG)
83MI, NI, NL, PI, QI...
(Lg, Lj, Sa, Lm, Lo...)
ZINC IONnon-polymer65.46Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains81
Total formula weight3829315.6
Non-Polymers*Number of molecules245
Total formula weight6201.3
All*Total formula weight3835517.0
*Water molecules are not included.

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon