4U67

Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A	50S ribosomal protein L2	polymer	275	30107.8	1	UniProt (Q9RXJ9) Pfam (PF00181) Pfam (PF03947) In PDB	Deinococcus radiodurans
2	B	50S ribosomal protein L3	polymer	211	22477.2	1	UniProt (Q9RXK2) Pfam (PF00297) In PDB	Deinococcus radiodurans
3	C	50S ribosomal protein L4	polymer	205	22308.2	1	UniProt (Q9RXK1) Pfam (PF00573) In PDB	Deinococcus radiodurans
4	D	50S ribosomal protein L5	polymer	180	20379.9	1	UniProt (Q9RXJ0) Pfam (PF00281) Pfam (PF00673) In PDB	Deinococcus radiodurans
5	E	50S ribosomal protein L6	polymer	185	19613.6	1	UniProt (Q9RSL3) Pfam (PF00347) In PDB	Deinococcus radiodurans
6	G	50S ribosomal protein L13	polymer	174	19223.2	1	UniProt (Q9RXY1) Pfam (PF00572) In PDB	Deinococcus radiodurans
7	H	50S ribosomal protein L14	polymer	134	14256.5	1	UniProt (Q9RXJ2) Pfam (PF00238) In PDB	Deinococcus radiodurans
8	I	50S ribosomal protein L15	polymer	156	16894.2	1	UniProt (Q9RSK9) Pfam (PF00828) In PDB	Deinococcus radiodurans
9	J	50S ribosomal protein L16	polymer	141	16126.0	1	UniProt (Q9RXJ5) Pfam (PF00252) In PDB	Deinococcus radiodurans
10	K	50S ribosomal protein L17	polymer	116	12926.1	1	UniProt (Q9RSJ5) Pfam (PF01196) In PDB	Deinococcus radiodurans
11	L	50S ribosomal protein L18	polymer	114	12163.9	1	UniProt (Q9RSL2) Pfam (PF00861) In PDB	Deinococcus radiodurans
12	M	50S ribosomal protein L19	polymer	166	18347.8	1	UniProt (Q9RWB4) Pfam (PF01245) In PDB	Deinococcus radiodurans
13	N	50S ribosomal protein L20	polymer	118	13991.3	1	UniProt (Q9RSW7) Pfam (PF00453) In PDB	Deinococcus radiodurans
14	O	50S ribosomal protein L21	polymer	100	11165.7	1	UniProt (Q9RY64) Pfam (PF00829) In PDB	Deinococcus radiodurans
15	P	50S ribosomal protein L22	polymer	137	15544.3	1	UniProt (Q9RXJ7) Pfam (PF00237) In PDB	Deinococcus radiodurans
16	Q	50S ribosomal protein L23	polymer	95	10539.2	1	UniProt (Q9RXK0) Pfam (PF00276) In PDB	Deinococcus radiodurans
17	R	50S ribosomal protein L24	polymer	114	12253.2	1	UniProt (Q9RXJ1) Pfam (PF00467) Pfam (PF17136) In PDB	Deinococcus radiodurans
18	S	50S ribosomal protein L25	polymer	237	25415.4	1	UniProt (Q9RX88) Pfam (PF01386) Pfam (PF14693) In PDB	Deinococcus radiodurans	General stress protein CTC
19	T	50S ribosomal protein L27	polymer	91	9609.1	1	UniProt (Q9RY65) Pfam (PF01016) In PDB	Deinococcus radiodurans
20	U	50S ribosomal protein L28	polymer	81	8982.6	1	UniProt (Q9RRG8) Pfam (PF00830) In PDB	Deinococcus radiodurans
21	V	50S ribosomal protein L29	polymer	67	7775.0	1	UniProt (Q9RXJ4) Pfam (PF00831) In PDB	Deinococcus radiodurans
22	W	50S ribosomal protein L30	polymer	55	6079.2	1	UniProt (Q9RSL0) Pfam (PF00327) In PDB	Deinococcus radiodurans
23	Z	50S ribosomal protein L32	polymer	60	6810.0	1	UniProt (P49228) Pfam (PF01783) In PDB	Deinococcus radiodurans
24	1	50S ribosomal protein L33	polymer	55	6374.5	1	UniProt (Q9RSS4) Pfam (PF00471) In PDB	Deinococcus radiodurans
25	2	50S ribosomal protein L34	polymer	47	5626.6	1	UniProt (Q9RSH2) Pfam (PF00468) In PDB	Deinococcus radiodurans
26	3	50S ribosomal protein L35	polymer	66	7448.1	1	UniProt (Q9RSW6) Pfam (PF01632) In PDB	Deinococcus radiodurans
27	X	23s RNA	polymer	2880	933405.0	1	GenBank (11612676)	Deinococcus radiodurans
28	Y	5s RNA	polymer	123	39605.7	1	GenBank (11612676)	Deinococcus radiodurans
29	X, K	MAGNESIUM ION	non-polymer		24.3	51	Chemie (MG)

Sequence modifications

P: 1 - 137 (UniProt: Q9RXJ7)

PDB	External Database	Details
Val 110	-	insertion
Pro 111	-	insertion
Arg 112	-	insertion

X: 1 - 2880 (GenBank: 11612676)

PDB	External Database	Details
U 1526	Unk 2586412	conflict

Contents of the asymmetric unit

Polymers	Number of chains	28
	Total formula weight	1345449.3
Non-Polymers*	Number of molecules	51
	Total formula weight	1239.6
All*	Total formula weight	1346688.9

*Water molecules are not included.