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4U4C

The molecular architecture of the TRAMP complex reveals the organization and interplay of its two catalytic activities

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
ATP-dependent RNA helicase DOB1polymer998113579.91UniProt (P47047)
Pfam (PF00270)
Pfam (PF00271)
Pfam (PF21408)
Pfam (PF13234)
Pfam (PF08148)
Saccharomyces cerevisiae (Baker's yeast)mRNA transport regulator MTR4
2B
(B)
Protein AIR2,Poly(A) RNA polymerase protein 2polymer11612830.81UniProt (Q12476)
UniProt (P53632)
Saccharomyces cerevisiae (Baker's yeast)Arginine methyltransferase-interacting RING finger protein 2,DNA polymerase kappa,DNA polymerase sigma,Topoisomerase 1-related protein TRF4
3C, D, E, F, G...
(A)
SULFATE IONnon-polymer96.17Chemie (SO4)
4J, K
(A)
1,2-ETHANEDIOLnon-polymer62.12Chemie (EDO)
5L, M
(A)
CHLORIDE IONnon-polymer35.52Chemie (CL)
6N, O
(A)
TETRAETHYLENE GLYCOLnon-polymer194.22Chemie (PG4)
7P
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
8Q, R
(A, B)
waterwater18.0221Chemie (HOH)
Sequence modifications
A: 81 - 1073 (UniProt: P47047)
PDBExternal DatabaseDetails
Gly 76-expression tag
Ala 77-expression tag
Ala 78-expression tag
Ser 79-expression tag
Met 80-expression tag
B: 1 - 62 (UniProt: Q12476)
PDBExternal DatabaseDetails
Gly -3-expression tag
Ala -2-expression tag
Ala -1-expression tag
Ser 0-expression tag
B: 111 - 160 (UniProt: P53632)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight126410.8
Non-Polymers*Number of molecules14
Total formula weight1362.1
All*Total formula weight127772.8
*Water molecules are not included.

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PDB entries from 2024-10-30

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