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4TS2

Crystal structure of the Spinach RNA aptamer in complex with DFHBI, magnesium ions

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(X)
Spinach aptamer RNA, bimolecular constructpolymer4414394.61synthetic construct
2B
(Y)
Spinach aptamer RNA, bimolecular constructpolymer4715220.91synthetic construct
3C
(A)
beta-D-fructofuranose-(2-1)-alpha-D-glucopyranosebranched342.31In PDB
BIRD (PRD_900003)
sucrose
4D
(X)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
5E, F, G
(Y)
POTASSIUM IONnon-polymer39.13Chemie (K)
6H
(Y)
(5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-onenon-polymer252.21Chemie (38E)
7I, J
(X, Y)
waterwater18.05Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight29615.5
BranchedNumber of molecules1
Total formula weight342.3
Non-Polymers*Number of molecules5
Total formula weight393.8
All*Total formula weight30351.6
*Water molecules are not included.

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PDB entries from 2025-06-11

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