4RCJ
Crystal structure of YTHDF1 YTH domain in complex with 5mer m6A RNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | YTH domain-containing family protein 1 | polymer | 191 | 22248.1 | 1 | UniProt (Q9BYJ9) Pfam (PF04146) | Homo sapiens (human) | Dermatomyositis associated with cancer putative autoantigen 1, DACA-1 |
| 2 | B (B) | RNA (5'-R(*GP*GP*(6MZ)P*CP*U)-3') | polymer | 5 | 1600.0 | 1 | synthetic construct | ||
| 3 | C, D, E, F, G... (A) | UNKNOWN ATOM OR ION | non-polymer | 7 | Chemie (UNX) | ||||
| 4 | J, K (A, B) | water | water | 18.0 | 177 | Chemie (HOH) |
Sequence modifications
A: 365 - 554 (UniProt: Q9BYJ9)
| PDB | External Database | Details |
|---|---|---|
| Gly 364 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 23848.1 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 0.0 | |
| All* | Total formula weight | 23848.1 |
