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4QXC

Crystal structure of histone demethylase KDM2A-H3K36ME2 with NOG

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
Lysine-specific demethylase 2Apolymer32939031.32UniProt (F6YRW4)
Pfam (PF17811)
UniProt (by SIFTS) (P59997)
Mus musculus (mouse)F-box and leucine-rich repeat protein 11, F-box/LRR-repeat protein 11, JmjC domain-containing histone demethylation protein 1A, [Histone-H3]-lysine-36 demethylase 1A
2B, D
(B, D)
Lysine-specific demethylase 2Apolymer687534.82UniProt (F6YRW4)
UniProt (by SIFTS) (P59997)
Mus musculus (mouse)F-box and leucine-rich repeat protein 11, F-box/LRR-repeat protein 11, JmjC domain-containing histone demethylation protein 1A, [Histone-H3]-lysine-36 demethylase 1A
3E, F
(E, F)
Histone H3.2polymer151667.02UniProt (P84228)Mus musculus
4G, I
(A, C)
N-OXALYLGLYCINEnon-polymer147.12Chemie (OGA)
5H, J
(A, C)
NICKEL (II) IONnon-polymer58.72Chemie (NI)
6K, L, M, N, O...
(A, B, C, D, E...)
waterwater18.0446Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight96466.1
Non-Polymers*Number of molecules4
Total formula weight411.6
All*Total formula weight96877.7
*Water molecules are not included.

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PDB entries from 2025-12-24

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