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4QM7

Structure of bacterial polynucleotide kinase bound to GTP and pDNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Metallophosphoesterasepolymer17119661.12UniProt (A3DJ38)
Pfam (PF13671)
Ruminiclostridium thermocellum
2C
(C)
DNApolymer41166.81
3D, F
(A, B)
GUANOSINE-5'-TRIPHOSPHATEnon-polymer523.22Chemie (GTP)
PubChem (177679032)
PubChem (135400627)
PubChem (135487750)
PubChem (136088935)
PubChem (136803486)
PubChem (135398633)
PubChem (135544356)
PubChem (135547949)
PubChem (135600366)
PubChem (135749822)
PubChem (136005188)
PubChem (136073923)
PubChem (136240914)
PubChem (136664747)
PubChem (136772743)
PubChem (136772744)
PubChem (136803487)
PubChem (137286749)
PubChem (164715984)
PubChem (171699466)
4E, G
(A, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
PubChem (888)
5H, I, J
(A, B, C)
waterwater18.0357Chemie (HOH)
Sequence modifications
A, B: 1 - 170 (UniProt: A3DJ38)
PDBExternal DatabaseDetails
Ser 0-expression tag
Mse 44Val 44conflict
Mse 137Leu 137conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight40488.9
Non-Polymers*Number of molecules4
Total formula weight1095.0
All*Total formula weight41583.9
*Water molecules are not included.

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PDB entries from 2026-05-06

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