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4QBQ

Crystal structure of DNMT3a ADD domain bound to H3 peptide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, C)
DNA (cytosine-5)-methyltransferase 3Apolymer13715386.82UniProt (Q9Y6K1)
Pfam (PF17980)
Pfam (PF21255)
Homo sapiens (human)Dnmt3a, DNA methyltransferase HsaIIIA, DNA MTase HsaIIIA, M.HsaIIIA
2C
(P)
Histone H3polymer8934.11UniProt (by SIFTS) (P68431)Homo sapiens
3D, E, F, G, H...
(A, C)
ZINC IONnon-polymer65.46Chemie (ZN)
4J, K, L
(A, C, P)
waterwater18.0104Chemie (HOH)
Sequence modifications
A, C: 479 - 610 (UniProt: Q9Y6K1)
PDBExternal DatabaseDetails
Gly 474-expression tag
Pro 475-expression tag
Leu 476-expression tag
Gly 477-expression tag
Ser 478-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight31707.6
Non-Polymers*Number of molecules6
Total formula weight392.5
All*Total formula weight32100.1
*Water molecules are not included.

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PDB entries from 2026-01-14

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