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4QA7

Crystal structure of H334R/Y306F HDAC8 in complex with a tetrapeptide substrate

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AHistone deacetylase 8polymer38943235.01UniProt (Q9BY41)
Pfam (PF00850)
In PDB
Homo sapiens (human)HD8
2Btetrapeptide substratepolymer5679.81
3AZINC IONnon-polymer65.41Chemie (ZN)
4APOTASSIUM IONnon-polymer39.12Chemie (K)
5B7-AMINO-4-METHYL-CHROMEN-2-ONEnon-polymer175.21Chemie (MCM)
6BGLYCEROLnon-polymer92.11Chemie (GOL)
7waterwater18.049Chemie (HOH)
Sequence modifications
A: 1 - 377 (UniProt: Q9BY41)
PDBExternal DatabaseDetails
Phe 306Tyr 306engineered mutation
Arg 334His 334engineered mutation
Ile 378-expression tag
Glu 379-expression tag
Gly 380-expression tag
Arg 381-expression tag
Gly 382-expression tag
Ser 383-expression tag
His 384-expression tag
His 385-expression tag
His 386-expression tag
His 387-expression tag
His 388-expression tag
His 389-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight43914.9
Non-Polymers*Number of molecules5
Total formula weight410.9
All*Total formula weight44325.7
*Water molecules are not included.

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PDB entries from 2024-04-24

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