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4Q5S

Thermus thermophilus RNA polymerase initially transcribing complex containing 6-mer RNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
DNA-directed RNA polymerase subunit alphapolymer31535056.22UniProt (Q9Z9H6)Thermus thermophilus
2C
(C)
DNA-directed RNA polymerase subunit betapolymer1119125436.51UniProt (Q8RQE9)
Pfam (PF04563)
Pfam (PF04561)
Pfam (PF04565)
Pfam (PF10385)
Pfam (PF00562)
Pfam (PF04560)
Thermus thermophilus
3D
(D)
DNA-directed RNA polymerase subunit beta'polymer1524170997.41UniProt (Q8RQE8)
Pfam (PF00623)
Pfam (PF04983)
Pfam (PF05000)
Pfam (PF04998)
Pfam (PF04997)
Pfam (PF21668)
Thermus thermophilus
4E
(E)
DNA-directed RNA polymerase subunit omegapolymer9911533.31UniProt (Q8RQE7)
Pfam (PF01192)
Thermus thermophilus HB8
5F
(F)
RNA polymerase sigma factor SigApolymer42348598.01UniProt (Q5SKW1)
Pfam (PF00140)
Pfam (PF04542)
Pfam (PF04539)
Pfam (PF04545)
Thermus thermophilus
6G
(G)
DNA (5'-D(*CP*CP*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*GP*CP*AP*GP*CP*CP*A)-3')polymer226713.31
7H
(H)
DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*AP*GP*G)-3')polymer278421.41
8I
(I)
RNA (5'-R(P*CP*UP*CP*AP*C)-3')polymer51506.01
9J
(D)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
10K, L
(D)
ZINC IONnon-polymer65.42Chemie (ZN)
11M
(I)
ADENOSINE-5'-TRIPHOSPHATEnon-polymer507.21Chemie (ATP)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains9
Total formula weight443318.3
Non-Polymers*Number of molecules4
Total formula weight662.3
All*Total formula weight443980.6
*Water molecules are not included.

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PDB entries from 2026-01-21

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