4Q3E
PylD cocrystallized with L-Ornithine-Nd-D-lysine and NAD+
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | PYLD, pyrrolysine synthase | polymer | 260 | 27963.8 | 2 | UniProt (Q46E80) Pfam (PF21455) | Methanosarcina barkeri | |
| 2 | C, J (A, B) | NICOTINAMIDE-ADENINE-DINUCLEOTIDE | non-polymer | 663.4 | 2 | Chemie (NAD) | |||
| 3 | D, K (A, B) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 4 | E, L (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 5 | F, M (A, B) | N~5~-D-lysyl-L-ornithine | non-polymer | 260.3 | 2 | Chemie (2YJ) | |||
| 6 | G, H, O (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
| 7 | I (A) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 8 | N (B) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 9 | P, Q (A, B) | water | water | 18.0 | 192 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 259 (UniProt: Q46E80)
| PDB | External Database | Details |
|---|---|---|
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 55927.6 | |
| Non-Polymers* | Number of molecules | 13 |
| Total formula weight | 2316.5 | |
| All* | Total formula weight | 58244.1 |
