4Q3E
PylD cocrystallized with L-Ornithine-Nd-D-lysine and NAD+
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | PYLD, pyrrolysine synthase | polymer | 260 | 27963.8 | 2 | UniProt (Q46E80) Pfam (PF21455) In PDB | Methanosarcina barkeri | |
2 | A, B | NICOTINAMIDE-ADENINE-DINUCLEOTIDE | non-polymer | 663.4 | 2 | Chemie (NAD) | |||
3 | A, B | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
4 | A, B | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
5 | A, B | N~5~-D-lysyl-L-ornithine | non-polymer | 260.3 | 2 | Chemie (2YJ) | |||
6 | A, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
7 | A | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
8 | B | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
9 | water | water | 18.0 | 192 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 259 (UniProt: Q46E80)
PDB | External Database | Details |
---|---|---|
Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 55927.6 | |
Non-Polymers* | Number of molecules | 13 |
Total formula weight | 2316.5 | |
All* | Total formula weight | 58244.1 |