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4PH9

The structure of Ibuprofen bound to cyclooxygenase-2

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Prostaglandin G/H synthase 2polymer55163460.42UniProt (Q05769)
Pfam (PF00008)
Pfam (PF03098)
Mus musculus (Mouse)Cyclooxygenase-2,COX-2,Glucocorticoid-regulated inflammatory cyclooxygenase,Gripghs,Macrophage activation-associated marker protein P71/73,PES-2,PHS II,Prostaglandin H2 synthase 2,PGHS-2,Prostaglandin-endoperoxide synthase 2,TIS10 protein
2C, D
(C, D)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.42In PDB
GlyTouCan (G42666HT)
3E
(E)
alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.51In PDB
GlyTouCan (G62182OO)
4F, T
(A, B)
IBUPROFENnon-polymer206.32Chemie (IBP)
5G, U
(A, B)
PROTOPORPHYRIN IX CONTAINING FEnon-polymer616.52Chemie (HEM)
6H, I, V
(A, B)
octyl beta-D-glucopyranosidenon-polymer292.43Chemie (BOG)
7J, K, W
(A, B)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.23Chemie (NAG)
8L, M, X, Y
(A, B)
ACRYLIC ACIDnon-polymer72.14Chemie (AKR)
9AA, BA, CA, DA, EA...
(B, A)
1,2-ETHANEDIOLnon-polymer62.113Chemie (EDO)
10GA, HA
(A, B)
waterwater18.01127Chemie (HOH)
Sequence modifications
A, B: 35 - 583 (UniProt: Q05769)
PDBExternal DatabaseDetails
His 33-expression tag
His 34-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight126920.8
BranchedNumber of molecules3
Total formula weight1435.3
Non-Polymers*Number of molecules27
Total formula weight4281.4
All*Total formula weight132637.6
*Water molecules are not included.

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PDB entries from 2025-06-25

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