4P5D
CRYSTAL STRUCTURE OF RAT DNPH1 (RCL) WITH 6-NAPHTHYL-PURINE-RIBOSIDE-MONOPHOSPHATE
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | C, A | 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 | polymer | 152 | 17173.3 | 2 | UniProt (O35820) Pfam (PF05014) In PDB | Rattus norvegicus (Rat) | Deoxyribonucleoside 5'-monophosphate N-glycosidase,c-Myc-responsive protein Rcl |
2 | C, A | 6-(naphthalen-2-yl)-9-(5-O-phosphono-beta-D-ribofuranosyl)-9H-purine | non-polymer | 458.4 | 2 | Chemie (N6P) | |||
3 | A | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
4 | water | water | 18.0 | 144 | Chemie (HOH) |
Sequence modifications
C, A: 11 - 151 (UniProt: O35820)
PDB | External Database | Details |
---|---|---|
Met 8 | - | initiating methionine |
Arg 9 | - | expression tag |
Arg 10 | - | expression tag |
Asn 69 | Asp 69 | engineered mutation |
Val 152 | - | expression tag |
Glu 153 | - | expression tag |
His 154 | - | expression tag |
His 155 | - | expression tag |
His 156 | - | expression tag |
His 157 | - | expression tag |
His 158 | - | expression tag |
His 159 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 34346.7 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 1012.8 | |
All* | Total formula weight | 35359.5 |