4OVL
Interrogating HIV integrase for compounds that bind- a SAMPL challenge
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Integrase | polymer | 183 | 20044.7 | 2 | UniProt (Q76353) Pfam (PF00665) UniProt (by SIFTS) (P12497) | Human immunodeficiency virus 1 | |
| 2 | C, D, L, M, N... (A, B) | SULFATE ION | non-polymer | 96.1 | 6 | Chemie (SO4) | |||
| 3 | E, F, G, H, I... (A, B) | ACETIC ACID | non-polymer | 60.1 | 7 | Chemie (ACY) | |||
| 4 | J, S (A, B) | 3-[(E)-(2-oxidanylidene-1H-indol-3-ylidene)methyl]benzoic acid | non-polymer | 265.3 | 2 | Chemie (1TD) | |||
| 5 | K (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 6 | P (B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 7 | T, U (A, B) | water | water | 18.0 | 137 | Chemie (HOH) |
Sequence modifications
A, B: 50 - 212 (UniProt: Q76353)
| PDB | External Database | Details |
|---|---|---|
| Met 30 | - | expression tag |
| Gly 31 | - | expression tag |
| Ser 32 | - | expression tag |
| Ser 33 | - | expression tag |
| His 34 | - | expression tag |
| His 35 | - | expression tag |
| His 36 | - | expression tag |
| His 37 | - | expression tag |
| His 38 | - | expression tag |
| His 39 | - | expression tag |
| Ser 40 | - | expression tag |
| Ser 41 | - | expression tag |
| Gly 42 | - | expression tag |
| Leu 43 | - | expression tag |
| Val 44 | - | expression tag |
| Pro 45 | - | expression tag |
| Arg 46 | - | expression tag |
| Gly 47 | - | expression tag |
| Ser 48 | - | expression tag |
| His 49 | - | expression tag |
| Ser 56 | Cys 56 | engineered mutation |
| Asp 139 | Phe 139 | engineered mutation |
| His 185 | Phe 185 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 40089.3 | |
| Non-Polymers* | Number of molecules | 17 |
| Total formula weight | 1681.4 | |
| All* | Total formula weight | 41770.8 |






