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4OJX

crystal structure of yeast phosphodiesterase-1 in complex with GMP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
3',5'-cyclic-nucleotide phosphodiesterase 1polymer36942070.01UniProt (P22434)
Pfam (PF02112)
Saccharomyces cerevisiae S288CPDEase 1,3':5'-CNP,Low-affinity cAMP phosphodiesterase
2B
(A)
(4S)-2-METHYL-2,4-PENTANEDIOLnon-polymer118.21Chemie (MPD)
3C
(A)
GUANOSINE-5'-MONOPHOSPHATEnon-polymer363.21Chemie (5GP)
4D, E
(A)
ZINC IONnon-polymer65.42Chemie (ZN)
5F
(A)
waterwater18.0215Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight42070.0
Non-Polymers*Number of molecules4
Total formula weight612.2
All*Total formula weight42682.2
*Water molecules are not included.

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PDB entries from 2025-07-02

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