4OJC
Crystal structure of the wild-type full-length trimeric ectodomain of the C. elegans fusion protein EFF-1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | EFF-1A | polymer | 580 | 64947.6 | 1 | UniProt (G5ECA1) Pfam (PF14884) In PDB | Caenorhabditis elegans (nematode) | Protein EFF-1, isoform a |
| 2 | B | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 3 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) | |||
| 4 | A | SULFATE ION | non-polymer | 96.1 | 9 | Chemie (SO4) | |||
| 5 | water | water | 18.0 | 19 | Chemie (HOH) |
Sequence modifications
A: 23 - 561 (UniProt: G5ECA1)
| PDB | External Database | Details |
|---|---|---|
| Arg 21 | - | expression tag |
| Ser 22 | - | expression tag |
| Gly 562 | - | expression tag |
| Pro 563 | - | expression tag |
| Phe 564 | - | expression tag |
| Glu 565 | - | expression tag |
| Asp 566 | - | expression tag |
| Asp 567 | - | expression tag |
| Asp 568 | - | expression tag |
| Asp 569 | - | expression tag |
| Lys 570 | - | expression tag |
| Ala 571 | - | expression tag |
| Gly 572 | - | expression tag |
| Trp 573 | - | expression tag |
| Ser 574 | - | expression tag |
| His 575 | - | expression tag |
| Pro 576 | - | expression tag |
| Gln 577 | - | expression tag |
| Phe 578 | - | expression tag |
| Glu 579 | - | expression tag |
| Lys 580 | - | expression tag |
| Gly 581 | - | expression tag |
| Gly 582 | - | expression tag |
| Gly 583 | - | expression tag |
| Ser 584 | - | expression tag |
| Gly 585 | - | expression tag |
| Gly 586 | - | expression tag |
| Gly 587 | - | expression tag |
| Ser 588 | - | expression tag |
| Gly 589 | - | expression tag |
| Gly 590 | - | expression tag |
| Gly 591 | - | expression tag |
| Ser 592 | - | expression tag |
| Trp 593 | - | expression tag |
| Ser 594 | - | expression tag |
| His 595 | - | expression tag |
| Pro 596 | - | expression tag |
| Gln 597 | - | expression tag |
| Phe 598 | - | expression tag |
| Glu 599 | - | expression tag |
| Lys 600 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 64947.6 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 424.4 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 1528.2 | |
| All* | Total formula weight | 66900.2 |
