4OGQ
Internal Lipid Architecture of the Hetero-Oligomeric Cytochrome b6f Complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Cytochrome b6 | polymer | 215 | 24291.6 | 1 | UniProt (P0A384) Pfam (PF00033) | Nostoc sp. | |
| 2 | B (B) | Cytochrome b6-f complex subunit 4 | polymer | 160 | 17548.8 | 1 | UniProt (Q93SX1) Pfam (PF00032) | Nostoc sp. | 17 kDa polypeptide |
| 3 | C (C) | Apocytochrome f | polymer | 333 | 35957.8 | 1 | UniProt (Q93SW9) Pfam (PF16639) Pfam (PF01333) | Nostoc sp. | |
| 4 | D (D) | Cytochrome b6-f complex iron-sulfur subunit 1 | polymer | 179 | 19216.6 | 1 | UniProt (Q93SX0) Pfam (PF25471) Pfam (PF00355) | Nostoc sp. | Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 1, ISP 1, RISP 1, Rieske iron-sulfur protein 1 |
| 5 | E (E) | Cytochrome b6-f complex subunit 6 | polymer | 31 | 3227.0 | 1 | UniProt (Q8YVQ2) Pfam (PF05115) | Nostoc sp. | Cytochrome b6-f complex subunit PetL, Cytochrome b6-f complex subunit VI |
| 6 | F (F) | Cytochrome b6-f complex subunit 7 | polymer | 34 | 3547.2 | 1 | UniProt (P0A3Y1) Pfam (PF08041) | Nostoc sp. | Cytochrome b6-f complex subunit PetM, Cytochrome b6-f complex subunit VII |
| 7 | G (G) | Cytochrome b6-f complex subunit 5 | polymer | 37 | 3997.8 | 1 | UniProt (P58246) Pfam (PF02529) | Nostoc sp. | Cytochrome b6-f complex subunit PetG, Cytochrome b6-f complex subunit V |
| 8 | H (H) | Cytochrome b6-f complex subunit 8 | polymer | 29 | 3234.9 | 1 | UniProt (P61048) Pfam (PF03742) | Nostoc sp. | Cytochrome b6-f complex subunit PetN, Cytochrome b6-f complex subunit VIII |
| 9 | I, J, K, X (A, C) | HEME C | non-polymer | 618.5 | 4 | Chemie (HEC) | |||
| 10 | AA, L, LA, R, T (D, A, G, B) | UNDECYL-MALTOSIDE | non-polymer | 496.6 | 5 | Chemie (UMQ) PubChem (44462510) PubChem (447793) PubChem (46936455) PubChem (58112566) PubChem (59518662) PubChem (5076192) PubChem (68343856) PubChem (70699429) PubChem (70701336) PubChem (70701337) PubChem (70839940) PubChem (70841479) PubChem (70863062) PubChem (71300308) PubChem (70699426) PubChem (70699431) PubChem (70796434) PubChem (89952000) PubChem (71300307) PubChem (92132109) PubChem (124643296) PubChem (126731015) PubChem (126731038) PubChem (126735855) PubChem (126735857) PubChem (131632466) PubChem (169544249) | |||
| 11 | CA, KA, M, W, Z (D, F, A, B, C) | (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate | non-polymer | 564.7 | 5 | Chemie (7PH) PubChem (24779689) PubChem (138276598) | |||
| 12 | N, O, P, S (A, B) | Octadecane | non-polymer | 254.5 | 4 | Chemie (8K6) PubChem (11635) | |||
| 13 | Q (A) | (1S,8E)-1-{[(2S)-3-hydroxy-2-{[(1S)-1-hydroxyoctadecyl]oxy}propyl]oxy}octadec-8-en-1-ol | non-polymer | 627.0 | 1 | Chemie (2WM) PubChem (137348092) PubChem (139033390) | |||
| 14 | U (B) | CHLOROPHYLL A | non-polymer | 893.5 | 1 | Chemie (CLA) | |||
| 15 | V (B) | (7R,17E)-4-HYDROXY-N,N,N,7-TETRAMETHYL-7-[(8E)-OCTADEC-8-ENOYLOXY]-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOS-17-EN-1-AMINIUM 4-OXIDE | non-polymer | 801.1 | 1 | Chemie (OPC) PubChem (21158846) PubChem (52944159) | |||
| 16 | Y (C) | CADMIUM ION | non-polymer | 112.4 | 1 | Chemie (CD) PubChem (31193) | |||
| 17 | BA (D) | PENTADECANE | non-polymer | 212.4 | 1 | Chemie (MYS) PubChem (12391) | |||
| 18 | DA (D) | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL | non-polymer | 795.1 | 1 | Chemie (SQD) PubChem (25147486) PubChem (25235342) PubChem (42607399) PubChem (5459390) PubChem (159321) PubChem (9810997) PubChem (9918745) PubChem (481096) PubChem (10219110) PubChem (10373133) PubChem (14463145) PubChem (102201395) PubChem (134765349) | |||
| 19 | EA (D) | FE2/S2 (INORGANIC) CLUSTER | non-polymer | 175.8 | 1 | Chemie (FES) | |||
| 20 | FA (D) | (1R)-1-{[(2S)-3-hydroxy-2-{[(1R)-1-hydroxypentyl]oxy}propyl]oxy}hexan-1-ol | non-polymer | 278.4 | 1 | Chemie (2WD) PubChem (137348091) PubChem (139033389) | |||
| 21 | GA (E) | (1S,8E,1'R,8'Z)-1,1'-{[(2S)-3-hydroxypropane-1,2-diyl]bis(oxy)}bisoctadec-8-en-1-ol | non-polymer | 625.0 | 1 | Chemie (3WM) PubChem (137348186) PubChem (139033339) | |||
| 22 | HA (F) | (1S,8E)-1-{[(2S)-1-hydroxy-3-{[(1S)-1-hydroxypentadecyl]oxy}propan-2-yl]oxy}heptadec-8-en-1-ol | non-polymer | 570.9 | 1 | Chemie (2WA) PubChem (137348090) PubChem (139033388) | |||
| 23 | IA (F) | N-OCTANE | non-polymer | 114.2 | 1 | Chemie (OCT) PubChem (356) | |||
| 24 | JA (F) | (2S)-3-(alpha-D-galactopyranosyloxy)-2-(hexadecanoyloxy)propyl (9Z)-octadec-9-enoate | non-polymer | 757.1 | 1 | Chemie (1O2) PubChem (177669147) PubChem (25032479) PubChem (44593354) PubChem (25202268) PubChem (46931128) PubChem (70678950) PubChem (6475756) PubChem (90324291) PubChem (72955714) PubChem (11422817) PubChem (123177764) PubChem (129661863) PubChem (134740331) PubChem (156492533) PubChem (162979109) PubChem (171360955) | |||
| 25 | MA (G) | BETA-CAROTENE | non-polymer | 536.9 | 1 | Chemie (BCR) PubChem (573) PubChem (21672398) PubChem (176490061) PubChem (177696266) PubChem (46783370) PubChem (46846294) PubChem (54603957) PubChem (54612003) PubChem (5315709) PubChem (5353436) PubChem (5356616) PubChem (5927371) PubChem (86765360) PubChem (6477957) PubChem (9828626) PubChem (91827292) PubChem (10256668) PubChem (92863346) PubChem (92863347) PubChem (92863348) PubChem (12305639) PubChem (12305640) PubChem (12305642) PubChem (12305644) PubChem (12305647) PubChem (12305652) PubChem (5280489) PubChem (92863345) PubChem (100990628) PubChem (101525094) PubChem (101525095) PubChem (124919640) PubChem (124919639) PubChem (129651951) PubChem (132274419) PubChem (146673260) PubChem (152743364) PubChem (160505766) PubChem (145925599) PubChem (159562859) PubChem (172654026) PubChem (172878405) PubChem (173398668) | |||
| 26 | NA, OA, PA, QA, RA... (A, B, C, D, F...) | water | water | 18.0 | 93 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 111021.6 | |
| Non-Polymers* | Number of molecules | 31 |
| Total formula weight | 15298.5 | |
| All* | Total formula weight | 126320.2 |
