4ODP
Structure of SlyD delta-IF from Thermus thermophilus in complex with S2-W23A peptide
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Peptidyl-prolyl cis-trans isomerase SlyD, Peptidyl-prolyl cis-trans isomerase FKBP1A chimera | polymer | 110 | 12179.5 | 1 | UniProt (Q5SLE7) UniProt (P62942) Pfam (PF00254) In PDB | Thermus thermophilus (bacteria human) | TtSlyD, PPIase FKBP1A, 12 kDa FK506-binding protein, 12 kDa FKBP, FKBP-12, Calstabin-1, FK506-binding protein 1A, FKBP-1A, Immunophilin FKBP12, Rotamase |
2 | B | 30S ribosomal protein S2 | polymer | 16 | 1742.1 | 1 | UniProt (P0A7V0) In PDB | Escherichia coli | |
3 | A | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
4 | A | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
5 | A | NICKEL (II) ION | non-polymer | 58.7 | 1 | Chemie (NI) | |||
6 | water | water | 18.0 | 101 | Chemie (HOH) |
Sequence modifications
A: 1 - 64 (UniProt: Q5SLE7)
A: 65 - 77 (UniProt: P62942)
A: 78 - 101 (UniProt: Q5SLE7)
B: 20 - 34 (UniProt: P0A7V0)
A: 65 - 77 (UniProt: P62942)
A: 78 - 101 (UniProt: Q5SLE7)
PDB | External Database | Details |
---|---|---|
Pro 102 | - | expression tag |
Ser 103 | - | expression tag |
Gly 104 | - | expression tag |
His 105 | - | expression tag |
His 106 | - | expression tag |
His 107 | - | expression tag |
His 108 | - | expression tag |
His 109 | - | expression tag |
His 110 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ala 23 | Trp 23 | engineered mutation |
Nh2 35 | - | amidation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 13921.6 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 254.5 | |
All* | Total formula weight | 14176.1 |