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4ODP

Structure of SlyD delta-IF from Thermus thermophilus in complex with S2-W23A peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2013-07-07
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.4000
Spacegroup nameP 41 3 2
Unit cell lengths93.690, 93.690, 93.690
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.627 - 1.747
R-factor0.1849
Rwork0.184
R-free0.20180
Structure solution methodSAD
RMSD bond length0.016
RMSD bond angle1.258
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX (AutoSol)
Refinement softwarePHENIX ((phenix.refine: 1.8.2_1309))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.6271.790
High resolution limit [Å]1.7471.747
Number of reflections14816
<I/σ(I)>35.853.6
Completeness [%]100.099.9
Redundancy17.616.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.527728% PEG400, 0.1 M HEPES, pH 7.5, 0.2 M calcium chloride, VAPOR DIFFUSION, SITTING DROP, temperature 277K

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PDB entries from 2024-07-17

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