4ODM
Structure of SlyD from Thermus thermophilus in complex with S2-W23A peptide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Peptidyl-prolyl cis-trans isomerase SlyD | polymer | 153 | 16768.7 | 4 | UniProt (Q5SLE7) Pfam (PF00254) | Thermus thermophilus | TtSlyD |
| 2 | E, F, G, H, I... (E, F, G, H, I...) | 30S ribosomal protein S2 | polymer | 16 | 1742.1 | 9 | UniProt (P0A7V0) | Escherichia coli | |
| 3 | N, Q, R, S (A, B, C, D) | CHLORIDE ION | non-polymer | 35.5 | 4 | Chemie (CL) | |||
| 4 | O (A) | ACETATE ION | non-polymer | 59.0 | 1 | Chemie (ACT) | |||
| 5 | P, T (A, D) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 6 | AA, BA, CA, DA, EA... (G, H, I, J, K...) | water | water | 18.0 | 606 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 149 (UniProt: Q5SLE7)
E, F, G, H, I, J, K, L, M: 20 - 34 (UniProt: P0A7V0)
| PDB | External Database | Details |
|---|---|---|
| Leu 150 | - | expression tag |
| Val 151 | - | expression tag |
| Pro 152 | - | expression tag |
| Lys 153 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ala 23 | Trp 23 | engineered mutation |
| Nh2 35 | - | amidation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 13 |
| Total formula weight | 82753.6 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 385.0 | |
| All* | Total formula weight | 83138.7 |
