4ODM
Structure of SlyD from Thermus thermophilus in complex with S2-W23A peptide
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003755 | molecular_function | peptidyl-prolyl cis-trans isomerase activity |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0016853 | molecular_function | isomerase activity |
| A | 0042026 | biological_process | protein refolding |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0003755 | molecular_function | peptidyl-prolyl cis-trans isomerase activity |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0016853 | molecular_function | isomerase activity |
| B | 0042026 | biological_process | protein refolding |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0003755 | molecular_function | peptidyl-prolyl cis-trans isomerase activity |
| C | 0003824 | molecular_function | catalytic activity |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0016853 | molecular_function | isomerase activity |
| C | 0042026 | biological_process | protein refolding |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0003755 | molecular_function | peptidyl-prolyl cis-trans isomerase activity |
| D | 0003824 | molecular_function | catalytic activity |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0016853 | molecular_function | isomerase activity |
| D | 0042026 | biological_process | protein refolding |
| D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE CL A 201 |
| Chain | Residue |
| A | TYR29 |
| A | LEU30 |
| A | ASN35 |
| A | HIS147 |
| A | ALA148 |
| A | HOH398 |
| E | LYS28 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ACT A 202 |
| Chain | Residue |
| A | ARG136 |
| A | HOH310 |
| A | HOH385 |
| A | SER28 |
| A | LYS134 |
| site_id | AC3 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL A 203 |
| Chain | Residue |
| A | ARG34 |
| A | HOH388 |
| A | HOH400 |
| A | HOH445 |
| C | GLN5 |
| C | HOH387 |
| E | ASN24 |
| E | MET27 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CL B 201 |
| Chain | Residue |
| B | TYR29 |
| B | LEU30 |
| B | ASN35 |
| B | HIS147 |
| B | ALA148 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CL C 201 |
| Chain | Residue |
| C | TYR29 |
| C | LEU30 |
| C | ASN35 |
| C | HIS147 |
| C | ALA148 |
| I | LYS28 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CL D 201 |
| Chain | Residue |
| D | TYR29 |
| D | LEU30 |
| D | ASN35 |
| D | ALA148 |
| D | HOH352 |
| site_id | AC7 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE GOL D 202 |
| Chain | Residue |
| C | ARG12 |
| C | TYR13 |
| C | THR14 |
| C | GLN129 |
| C | VAL130 |
| C | GLU131 |
| D | GLY98 |
| D | ASN99 |
| D | PRO100 |
