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4O6F

Structural Basis of Estrogen Receptor Alpha Methylation Mediated by Histone Methyltransferase SmyD2

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
N-lysine methyltransferase SMYD2polymer43349832.21UniProt (Q9NRG4)
Pfam (PF00856)
Pfam (PF01753)
Homo sapiens (human)HSKM-B, Histone methyltransferase SMYD2, Lysine N-methyltransferase 3C, SET and MYND domain-containing protein 2
2B
(B)
Estrogen receptorpolymer111372.71UniProt (P03372)Homo sapiensER, ER-alpha, Estradiol receptor, Nuclear receptor subfamily 3 group A member 1
3C, D, E
(A)
ZINC IONnon-polymer65.43Chemie (ZN)
4F
(A)
S-ADENOSYL-L-HOMOCYSTEINEnon-polymer384.41Chemie (SAH)
5G
(A)
3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOLnon-polymer370.41Chemie (PE8)
6H, I
(A)
NICKEL (II) IONnon-polymer58.72Chemie (NI)
7J, K
(A, B)
waterwater18.094Chemie (HOH)
Sequence modifications
A: 1 - 433 (UniProt: Q9NRG4)
PDBExternal DatabaseDetails
Glu 165Gly 165engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight51204.9
Non-Polymers*Number of molecules7
Total formula weight1068.5
All*Total formula weight52273.3
*Water molecules are not included.

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PDB entries from 2025-06-11

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