4NYT
L-Ficolin Complexed to Phosphocholine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (C, A, B) | Ficolin-2 | polymer | 217 | 24615.2 | 3 | UniProt (Q15485) Pfam (PF00147) | Homo sapiens (human) | 37 kDa elastin-binding protein, Collagen/fibrinogen domain-containing protein 2, EBP-37, Ficolin-B, Ficolin-beta, Hucolin, L-ficolin, Serum lectin p35 |
| 2 | D (D) | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G47477HI) | |||
| 3 | E, H (C, A) | ACETATE ION | non-polymer | 59.0 | 2 | Chemie (ACT) | |||
| 4 | F, K, L, M (C, A, B) | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
| 5 | G (C) | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 6 | I (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 7 | J (A) | PHOSPHOCHOLINE | non-polymer | 184.2 | 1 | Chemie (PC) | |||
| 8 | N, O, P (C, A, B) | water | water | 18.0 | 70 | Chemie (HOH) |
Sequence modifications
C, A, B: 72 - 288 (UniProt: Q15485)
| PDB | External Database | Details |
|---|---|---|
| Thr 168 | Val 193 | SEE REMARK 999 |
| Thr 247 | Val 272 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 73845.7 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 732.7 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 778.7 | |
| All* | Total formula weight | 75357.1 |
