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4MZG

Crystal structure of human Spindlin1 bound to histone H3K4me3 peptide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
Peptide from Histone H3.2polymer202232.72UniProt (Q71DI3)Homo sapiensHistone H3/m, Histone H3/o
2B, D
(B, D)
Spindlin-1polymer22225509.72UniProt (Q9Y657)
Pfam (PF02513)
Homo sapiens (human)SP1, Ovarian cancer-related protein
3E
(B)
(4R)-2-METHYLPENTANE-2,4-DIOLnon-polymer118.21Chemie (MRD)
4F, I, J
(B, D)
(4S)-2-METHYL-2,4-PENTANEDIOLnon-polymer118.23Chemie (MPD)
5G
(B)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
6H, K, L
(B, D)
CHLORIDE IONnon-polymer35.53Chemie (CL)
7M, N, O, P
(A, B, C, D)
waterwater18.0360Chemie (HOH)
Sequence modifications
B, D: 50 - 262 (UniProt: Q9Y657)
PDBExternal DatabaseDetails
His 41-EXPRESSION TAG
His 42-EXPRESSION TAG
His 43-EXPRESSION TAG
His 44-EXPRESSION TAG
His 45-EXPRESSION TAG
His 46-EXPRESSION TAG
Gly 47-EXPRESSION TAG
Ser 48-EXPRESSION TAG
Met 49-EXPRESSION TAG
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight55484.8
Non-Polymers*Number of molecules8
Total formula weight603.4
All*Total formula weight56088.2
*Water molecules are not included.

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PDB entries from 2024-10-30

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