4MUQ
Crystal Structure of Vancomycin Resistance D,D-dipeptidase VanXYg in complex with D-Ala-D-Ala phosphinate analog
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | D,D-dipeptidase/D,D-carboxypeptidase | polymer | 255 | 29588.4 | 1 | UniProt (Q9KHL8) Pfam (PF02557) | Enterococcus faecalis | D,D-peptidase, VanXYG |
| 2 | B (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 3 | C (A) | (2R)-3-[(R)-[(1R)-1-aminoethyl](hydroxy)phosphoryl]-2-methylpropanoic acid | non-polymer | 195.2 | 1 | Chemie (LY0) | |||
| 4 | D (A) | (2R)-3-[(R)-[(1S)-1-aminoethyl](hydroxy)phosphoryl]-2-methylpropanoic acid | non-polymer | 195.2 | 1 | Chemie (2D8) | |||
| 5 | E (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 6 | F, G (A) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 7 | H, I, J, K (A) | 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL | non-polymer | 634.8 | 4 | Chemie (PE3) | |||
| 8 | L (A) | water | water | 18.0 | 285 | Chemie (HOH) |
Sequence modifications
A: 1 - 254 (UniProt: Q9KHL8)
| PDB | External Database | Details |
|---|---|---|
| Gly 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 29588.4 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 3241.0 | |
| All* | Total formula weight | 32829.3 |
