4MSL
Crystal structure of the Vps10p domain of human sortilin/NTS3 in complex with AF40431
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Sortilin | polymer | 696 | 77790.9 | 1 | UniProt (Q99523) Pfam (PF15902) Pfam (PF15901) In PDB | Homo sapiens (human) | 100 kDa NT receptor, Glycoprotein 95, Gp95, Neurotensin receptor 3, NT3, NTR3 |
2 | B | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G22573RC) | |||
3 | C | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
4 | A | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 1 | Chemie (PG4) | |||
5 | A | N-[(7-hydroxy-4-methyl-2-oxo-2H-chromen-8-yl)methyl]-L-leucine | non-polymer | 319.4 | 1 | Chemie (2ET) | |||
6 | water | water | 18.0 | 67 | Chemie (HOH) |
Sequence modifications
A: 45 - 723 (UniProt: Q99523)
PDB | External Database | Details |
---|---|---|
Met 617 | Val 650 | variant |
Gly 724 | - | expression tag |
Ser 725 | - | expression tag |
Ala 726 | - | expression tag |
Met 727 | - | expression tag |
Ile 728 | - | expression tag |
Glu 729 | - | expression tag |
Gly 730 | - | expression tag |
Arg 731 | - | expression tag |
Gly 732 | - | expression tag |
Val 733 | - | expression tag |
Gly 734 | - | expression tag |
His 735 | - | expression tag |
His 736 | - | expression tag |
His 737 | - | expression tag |
His 738 | - | expression tag |
His 739 | - | expression tag |
His 740 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 77790.9 | |
Branched | Number of molecules | 2 |
Total formula weight | 1335.2 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 513.6 | |
All* | Total formula weight | 79639.7 |