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4M9E

Structure of Klf4 zinc finger DNA binding domain in complex with methylated DNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Krueppel-like factor 4polymer8810428.81UniProt (Q60793)
Pfam (PF00096)
Mus musculus (mouse)Epithelial zinc finger protein EZF, Gut-enriched krueppel-like factor
2B
(B)
DNA (5'-D(*GP*AP*GP*GP*(5CM)P*GP*TP*GP*GP*C)-3')polymer103140.11
3C
(C)
DNA (5'-D(*GP*CP*CP*AP*(5CM)P*GP*CP*CP*TP*C)-3')polymer102980.01
4D
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
5E
(A)
ACETATE IONnon-polymer59.01Chemie (ACT)
6F, G, H
(A)
ZINC IONnon-polymer65.43Chemie (ZN)
7I, J, K
(A, B, C)
waterwater18.0134Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight16548.8
Non-Polymers*Number of molecules5
Total formula weight347.4
All*Total formula weight16896.2
*Water molecules are not included.

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PDB entries from 2025-12-03

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