4LF4
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | 16S rRNA | polymer | 1522 | 494114.7 | 1 | GenBank (M26923.1) | Thermus thermophilus | |
| 2 | B | ribosomal protein S2 | polymer | 256 | 29317.7 | 1 | UniProt (P80371) Pfam (PF00318) In PDB | Thermus thermophilus | |
| 3 | C | ribosomal protein S3 | polymer | 239 | 26751.1 | 1 | UniProt (P80372) Pfam (PF07650) Pfam (PF00189) In PDB | Thermus thermophilus | |
| 4 | D | ribosomal protein S4 | polymer | 209 | 24373.4 | 1 | UniProt (P80373) Pfam (PF00163) Pfam (PF01479) In PDB | Thermus thermophilus | |
| 5 | E | ribosomal protein S5 | polymer | 162 | 17583.4 | 1 | UniProt (Q5SHQ5) Pfam (PF00333) Pfam (PF03719) In PDB | Thermus thermophilus | |
| 6 | F | ribosomal protein S6 | polymer | 101 | 11988.8 | 1 | UniProt (Q5SLP8) Pfam (PF01250) In PDB | Thermus thermophilus | |
| 7 | G | ribosomal protein S7 | polymer | 156 | 18051.0 | 1 | UniProt (P17291) Pfam (PF00177) In PDB | Thermus thermophilus | |
| 8 | H | ribosomal protein S8 | polymer | 138 | 15868.6 | 1 | UniProt (Q5SHQ2) In PDB | Thermus thermophilus | |
| 9 | I | ribosomal protein S9 | polymer | 128 | 14410.6 | 1 | UniProt (P80374) Pfam (PF00380) In PDB | Thermus thermophilus | |
| 10 | J | ribosomal protein S10 | polymer | 105 | 11955.0 | 1 | UniProt (Q5SHN7) Pfam (PF00338) In PDB | Thermus thermophilus | |
| 11 | K | ribosomal protein S11 | polymer | 129 | 13737.9 | 1 | UniProt (P80376) Pfam (PF00411) In PDB | Thermus thermophilus | |
| 12 | L | ribosomal protein S12 | polymer | 135 | 14966.8 | 1 | UniProt (F6DEQ7) Pfam (PF00164) In PDB | Thermus thermophilus | |
| 13 | M | ribosomal protein S13 | polymer | 126 | 14338.9 | 1 | UniProt (P80377) Pfam (PF00416) In PDB | Thermus thermophilus | |
| 14 | N | ribosomal protein S14 | polymer | 61 | 7158.7 | 1 | UniProt (Q5SHQ1) In PDB | Thermus thermophilus | |
| 15 | O | ribosomal protein S15 | polymer | 89 | 10578.4 | 1 | UniProt (Q5SJ76) Pfam (PF00312) In PDB | Thermus thermophilus | |
| 16 | P | ribosomal protein S16 | polymer | 88 | 10410.0 | 1 | UniProt (Q5SJH3) Pfam (PF00886) In PDB | Thermus thermophilus | |
| 17 | Q | ribosomal protein S17 | polymer | 105 | 12325.7 | 1 | UniProt (Q5SHP7) In PDB | Thermus thermophilus | |
| 18 | R | ribosomal protein S18 | polymer | 88 | 10258.3 | 1 | UniProt (Q5SLQ0) Pfam (PF01084) In PDB | Thermus thermophilus | |
| 19 | S | ribosomal protein S19 | polymer | 93 | 10605.5 | 1 | UniProt (Q5SHP2) Pfam (PF00203) In PDB | Thermus thermophilus | |
| 20 | T | ribosomal protein S20 | polymer | 106 | 11736.1 | 1 | UniProt (P80380) Pfam (PF01649) In PDB | Thermus thermophilus | |
| 21 | U | ribosomal protein THX | polymer | 27 | 3350.0 | 1 | UniProt (Q5SIH3) Pfam (PF17070) In PDB | Thermus thermophilus | |
| 22 | A, J, K, L, M... | MAGNESIUM ION | non-polymer | 24.3 | 153 | Chemie (MG) | |||
| 23 | A, E | POTASSIUM ION | non-polymer | 39.1 | 10 | Chemie (K) | |||
| 24 | A | (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDROXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL | non-polymer | 449.5 | 1 | Chemie (LLL) | |||
| 25 | N, D | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 26 | water | water | 18.0 | 6 | Chemie (HOH) |
Sequence modifications
A: 0 - 1544 (GenBank: M26923.1)
| PDB | External Database | Details |
|---|---|---|
| C 1533 | A 2157 | CONFLICT |
| A 1534 | C 2158 | CONFLICT |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 21 |
| Total formula weight | 783880.5 | |
| Non-Polymers* | Number of molecules | 166 |
| Total formula weight | 4690.0 | |
| All* | Total formula weight | 788570.5 |
