4L9Y
Crystal Structure of Rhodobacter sphaeroides malyl-CoA lyase in complex with magnesium, glyoxylate, and propionyl-CoA
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E... | Malyl-CoA lyase | polymer | 339 | 36859.7 | 6 | UniProt (Q3J5L6) Pfam (PF03328) In PDB | Rhodobacter sphaeroides | (3S)-malyl-CoA/beta-methylmalyl-CoA lyase, L-malyl-CoA/beta-methylmalyl-CoA lyase |
2 | A, B, C, D, E... | MAGNESIUM ION | non-polymer | 24.3 | 6 | Chemie (MG) | |||
3 | A, C, E, F | CHLORIDE ION | non-polymer | 35.5 | 4 | Chemie (CL) | |||
4 | B | propionyl Coenzyme A | non-polymer | 823.6 | 1 | Chemie (1VU) | |||
5 | B, D | GLYOXYLIC ACID | non-polymer | 74.0 | 2 | Chemie (GLV) | |||
6 | water | water | 18.0 | 1569 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 1 - 318 (UniProt: Q3J5L6)
PDB | External Database | Details |
---|---|---|
Met -20 | - | expression tag |
Gly -19 | - | expression tag |
His -18 | - | expression tag |
His -17 | - | expression tag |
His -16 | - | expression tag |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
His -9 | - | expression tag |
Ser -8 | - | expression tag |
Ser -7 | - | expression tag |
Gly -6 | - | expression tag |
His -5 | - | expression tag |
Ile -4 | - | expression tag |
Glu -3 | - | expression tag |
Gly -2 | - | expression tag |
Arg -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 221158.1 | |
Non-Polymers* | Number of molecules | 13 |
Total formula weight | 1259.3 | |
All* | Total formula weight | 222417.4 |