4L9Y

Crystal Structure of Rhodobacter sphaeroides malyl-CoA lyase in complex with magnesium, glyoxylate, and propionyl-CoA

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C, D, E... (A, B, C, D, E...)	Malyl-CoA lyase	polymer	339	36859.7	6	UniProt (Q3J5L6) Pfam (PF03328)	Rhodobacter sphaeroides	(3S)-malyl-CoA/beta-methylmalyl-CoA lyase, L-malyl-CoA/beta-methylmalyl-CoA lyase
2	G, K, L, O, P... (A, B, C, D, E...)	MAGNESIUM ION	non-polymer		24.3	6	Chemie (MG) PubChem (888)
3	H, M, Q, S (A, C, E, F)	CHLORIDE ION	non-polymer		35.5	4	Chemie (CL) PubChem (312)
4	I (B)	propionyl Coenzyme A	non-polymer		823.6	1	Chemie (1VU) PubChem (439164) PubChem (46907879) PubChem (57502401) PubChem (1033) PubChem (92753) PubChem (171391269) PubChem (146162324) PubChem (169445961)
5	J, N (B, D)	GLYOXYLIC ACID	non-polymer		74.0	2	Chemie (GLV) PubChem (760)
6	T, U, V, W, X... (A, B, C, D, E...)	water	water		18.0	1569	Chemie (HOH)

Sequence modifications

A, B, C, D, E, F: 1 - 318 (UniProt: Q3J5L6)

PDB	External Database	Details
Met -20	-	expression tag
Gly -19	-	expression tag
His -18	-	expression tag
His -17	-	expression tag
His -16	-	expression tag
His -15	-	expression tag
His -14	-	expression tag
His -13	-	expression tag
His -12	-	expression tag
His -11	-	expression tag
His -10	-	expression tag
His -9	-	expression tag
Ser -8	-	expression tag
Ser -7	-	expression tag
Gly -6	-	expression tag
His -5	-	expression tag
Ile -4	-	expression tag
Glu -3	-	expression tag
Gly -2	-	expression tag
Arg -1	-	expression tag
His 0	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	6
	Total formula weight	221158.1
Non-Polymers*	Number of molecules	13
	Total formula weight	1259.3
All*	Total formula weight	222417.4

*Water molecules are not included.