4JF7
Structure of the parainfluenza virus 5 (PIV5) hemagglutinin-neuraminidase (HN) ectodomain
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (D, A, B, C) | Hemagglutinin-neuraminidase | polymer | 513 | 56545.7 | 4 | UniProt (P04850) Pfam (PF00423) | Simian virus 5 (SV5) | |
| 2 | E, F (E, F) | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 2 | In PDB GlyTouCan (G62182OO) | |||
| 3 | G, H, I, J (G, H, I, J) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
| 4 | K, N, R, U (D, A, B, C) | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
| 5 | L, P, S, V (D, A, B, C) | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
| 6 | M, O, Q, T, W... (D, A, B, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 6 | Chemie (NAG) | |||
| 7 | AA, BA, Y, Z (B, C, D, A) | water | water | 18.0 | 688 | Chemie (HOH) |
Sequence modifications
D, A, B, C: 55 - 565 (UniProt: P04850)
| PDB | External Database | Details |
|---|---|---|
| Ser 53 | - | expression tag |
| Pro 54 | - | expression tag |
| Ser 55 | Asn 55 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 226182.8 | |
| Branched | Number of molecules | 6 |
| Total formula weight | 2870.7 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 1871.8 | |
| All* | Total formula weight | 230925.3 |
