4JF7
Structure of the parainfluenza virus 5 (PIV5) hemagglutinin-neuraminidase (HN) ectodomain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 200 |
Detector technology | IMAGE PLATE |
Collection date | 2011-11-28 |
Detector | MAR scanner 300 mm plate |
Wavelength(s) | 0.97872 |
Spacegroup name | I 4 |
Unit cell lengths | 194.390, 194.390, 185.979 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.364 - 2.502 |
R-factor | 0.1663 |
Rwork | 0.166 |
R-free | 0.20680 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.180 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Refinement software | PHENIX ((phenix.refine: 1.7.3_928)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.000 | 35.000 | 2.590 |
High resolution limit [Å] | 2.500 | 5.380 | 2.500 |
Rmerge | 0.082 | 0.037 | 0.522 |
Number of reflections | 118507 | ||
<I/σ(I)> | 20.3 | ||
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 6.3 | 6.2 | 6.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.6 | 298 | 1.6 M ammonium sulfate, 0.1 M MES monohydrate pH 6.5, 10% v/v 1,4-dioxane, VAPOR DIFFUSION, SITTING DROP, temperature 298K |