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4J49

PylD holoenzyme soaked with L-lysine-Ne-D-ornithine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
PylDpolymer25927876.72UniProt (Q46E80)Methanosarcina barkeri
2C
(A)
NICOTINAMIDE-ADENINE-DINUCLEOTIDEnon-polymer663.41Chemie (NAD)
3D, H
(A, B)
SODIUM IONnon-polymer23.02Chemie (NA)
PubChem (923)
4E, I
(A, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
PubChem (888)
5F
(B)
1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDEnon-polymer665.41Chemie (NAI)
PubChem (16219774)
PubChem (44119956)
PubChem (44415182)
PubChem (439153)
PubChem (124934832)
PubChem (126455899)
PubChem (134693949)
PubChem (12309339)
PubChem (12309347)
PubChem (140875346)
PubChem (162951601)
PubChem (162951600)
PubChem (164575491)
PubChem (169545638)
PubChem (170905224)
PubChem (174316169)
PubChem (94865921)
PubChem (94865923)
PubChem (928)
PubChem (124432988)
PubChem (124934831)
PubChem (124934833)
PubChem (11250888)
PubChem (129607000)
PubChem (129628338)
PubChem (12309341)
PubChem (146167236)
PubChem (162951602)
PubChem (174084875)
6G
(B)
N~6~-[(2R)-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]-L-lysinenon-polymer241.31Chemie (1J1)
PubChem (46190579)
PubChem (51055212)
PubChem (68612362)
PubChem (90657467)
PubChem (143981878)
7J, K
(A, B)
waterwater18.0186Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight55753.5
Non-Polymers*Number of molecules7
Total formula weight1664.7
All*Total formula weight57418.2
*Water molecules are not included.

253795

PDB entries from 2026-05-20

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