4H2X
Crystal structure of engineered Bradyrhizobium japonicum glycine:[carrier protein] ligase complexed with carrier protein from Agrobacterium tumefaciens and an analogue of glycyl adenylate
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Amino acid--[acyl-carrier-protein] ligase 1 | polymer | 346 | 38205.1 | 1 | UniProt (Q89VT8) UniProt (Q7CWR3) Pfam (PF00587) In PDB | Bradyrhizobium japonicum | Aminoacyl-[acyl-carrier-protein] synthetase 1 |
2 | B | Amino acid--[acyl-carrier-protein] ligase 1 | polymer | 346 | 38173.1 | 1 | UniProt (Q89VT8) UniProt (Q7CWR3) Pfam (PF00587) In PDB | Bradyrhizobium japonicum | Aminoacyl-[acyl-carrier-protein] synthetase 1 |
3 | C, D | Aminoacyl carrier protein | polymer | 103 | 11165.6 | 2 | UniProt (A9CHM9) Pfam (PF00550) In PDB | Agrobacterium tumefaciens | |
4 | A, B | 5'-O-(glycylsulfamoyl)adenosine | non-polymer | 403.4 | 2 | Chemie (G5A) | |||
5 | A, B | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
6 | B | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
7 | C, D | 4'-PHOSPHOPANTETHEINE | non-polymer | 358.3 | 2 | Chemie (PNS) | |||
8 | water | water | 18.0 | 347 | Chemie (HOH) |
Sequence modifications
A: 1 - 220 (UniProt: Q89VT8)
A: 221 - 231 (UniProt: Q7CWR3)
A: 232 - 326 (UniProt: Q89VT8)
B: 1 - 220 (UniProt: Q89VT8)
B: 221 - 231 (UniProt: Q7CWR3)
B: 232 - 326 (UniProt: Q89VT8)
C, D: 1 - 83 (UniProt: A9CHM9)
PDB | External Database | Details |
---|---|---|
Met -19 | - | EXPRESSION TAG |
Gly -18 | - | EXPRESSION TAG |
Ser -17 | - | EXPRESSION TAG |
Ser -16 | - | EXPRESSION TAG |
His -15 | - | EXPRESSION TAG |
His -14 | - | EXPRESSION TAG |
His -13 | - | EXPRESSION TAG |
His -12 | - | EXPRESSION TAG |
His -11 | - | EXPRESSION TAG |
His -10 | - | EXPRESSION TAG |
Ser -9 | - | EXPRESSION TAG |
Ser -8 | - | EXPRESSION TAG |
Gly -7 | - | EXPRESSION TAG |
Leu -6 | - | EXPRESSION TAG |
Val -5 | - | EXPRESSION TAG |
Pro -4 | - | EXPRESSION TAG |
Arg -3 | - | EXPRESSION TAG |
Gly -2 | - | EXPRESSION TAG |
Ser -1 | - | EXPRESSION TAG |
His 0 | - | EXPRESSION TAG |
A: 232 - 326 (UniProt: Q89VT8)
B: 1 - 220 (UniProt: Q89VT8)
PDB | External Database | Details |
---|---|---|
Met -19 | - | EXPRESSION TAG |
Gly -18 | - | EXPRESSION TAG |
Ser -17 | - | EXPRESSION TAG |
Ser -16 | - | EXPRESSION TAG |
His -15 | - | EXPRESSION TAG |
His -14 | - | EXPRESSION TAG |
His -13 | - | EXPRESSION TAG |
His -12 | - | EXPRESSION TAG |
His -11 | - | EXPRESSION TAG |
His -10 | - | EXPRESSION TAG |
Ser -9 | - | EXPRESSION TAG |
Ser -8 | - | EXPRESSION TAG |
Gly -7 | - | EXPRESSION TAG |
Leu -6 | - | EXPRESSION TAG |
Val -5 | - | EXPRESSION TAG |
Pro -4 | - | EXPRESSION TAG |
Arg -3 | - | EXPRESSION TAG |
Gly -2 | - | EXPRESSION TAG |
Ser -1 | - | EXPRESSION TAG |
His 0 | - | EXPRESSION TAG |
B: 232 - 326 (UniProt: Q89VT8)
C, D: 1 - 83 (UniProt: A9CHM9)
PDB | External Database | Details |
---|---|---|
Met -19 | - | EXPRESSION TAG |
Gly -18 | - | EXPRESSION TAG |
Ser -17 | - | EXPRESSION TAG |
Ser -16 | - | EXPRESSION TAG |
His -15 | - | EXPRESSION TAG |
His -14 | - | EXPRESSION TAG |
His -13 | - | EXPRESSION TAG |
His -12 | - | EXPRESSION TAG |
His -11 | - | EXPRESSION TAG |
His -10 | - | EXPRESSION TAG |
Ser -9 | - | EXPRESSION TAG |
Ser -8 | - | EXPRESSION TAG |
Gly -7 | - | EXPRESSION TAG |
Leu -6 | - | EXPRESSION TAG |
Val -5 | - | EXPRESSION TAG |
Pro -4 | - | EXPRESSION TAG |
Arg -3 | - | EXPRESSION TAG |
Gly -2 | - | EXPRESSION TAG |
Ser -1 | - | EXPRESSION TAG |
His 0 | - | EXPRESSION TAG |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 98709.5 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 1659.8 | |
All* | Total formula weight | 100369.2 |