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4H12

The crystal structure of methyltransferase domain of human SET domain-containing protein 2 in complex with S-adenosyl-L-homocysteine

Replaces:  3H6L
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Histone-lysine N-methyltransferase SETD2polymer27831955.51UniProt (Q9BYW2)
Pfam (PF17907)
Pfam (PF00856)
Homo sapiens (human)HIF-1, Huntingtin yeast partner B, Huntingtin-interacting protein 1, HIP-1, Huntingtin-interacting protein B, Lysine N-methyltransferase 3A, SET domain-containing protein 2, hSET2, p231HBP
2B, C, D
(A)
ZINC IONnon-polymer65.43Chemie (ZN)
3E
(A)
S-ADENOSYL-L-HOMOCYSTEINEnon-polymer384.41Chemie (SAH)
PubChem (16760024)
PubChem (193)
PubChem (13792)
PubChem (177678424)
PubChem (189149)
PubChem (439155)
PubChem (25210495)
PubChem (21125603)
PubChem (44361184)
PubChem (25203782)
PubChem (46936206)
PubChem (50989525)
PubChem (51380914)
PubChem (52224398)
PubChem (57544532)
PubChem (52224400)
PubChem (59046843)
PubChem (59170628)
PubChem (59576228)
PubChem (66805708)
PubChem (5284331)
PubChem (70689219)
PubChem (70702054)
PubChem (70832431)
PubChem (71170554)
PubChem (13231890)
PubChem (6419189)
PubChem (118374891)
PubChem (118560068)
PubChem (126969526)
PubChem (129105892)
PubChem (164157219)
PubChem (143518505)
PubChem (154578335)
PubChem (163054214)
PubChem (163335525)
4F
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
PubChem (312)
5G
(A)
waterwater18.0124Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight31955.5
Non-Polymers*Number of molecules5
Total formula weight616.1
All*Total formula weight32571.6
*Water molecules are not included.

251422

PDB entries from 2026-04-01

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