4GZ0
Mus Musculus Tdp2-DNA Substrate Analog (5'-6-aminohexanol) Complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, E, G, I... (A, B, E, K, G...) | Tyrosyl-DNA phosphodiesterase 2 | polymer | 256 | 28890.2 | 6 | UniProt (Q9JJX7) Pfam (PF03372) | Mus musculus (mouse) | Tyr-DNA phosphodiesterase 2, 5'-tyrosyl-DNA phosphodiesterase, 5'-Tyr-DNA phosphodiesterase, TRAF and TNF receptor-associated protein |
| 2 | C, D, F, H, J... (C, D, F, L, H...) | DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') | polymer | 9 | 2715.8 | 6 | |||
| 3 | AA, AB, AC, AD, AE... (A, B, E, K, H...) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 113 | Chemie (EDO) | |||
| 4 | FD, GD, HD, IA, JA... (K, A, B, E, I...) | ACETATE ION | non-polymer | 59.0 | 22 | Chemie (ACT) | |||
| 5 | ID, MB, NB, PC, VE... (L, C, D, F, J...) | 6-aminohexan-1-ol | non-polymer | 117.2 | 6 | Chemie (6AH) | |||
| 6 | AF, BF, CF, DF, EF... (D, E, F, K, L...) | water | water | 18.0 | 1040 | Chemie (HOH) |
Sequence modifications
A, B, E, K, G, I: 118 - 370 (UniProt: Q9JJX7)
| PDB | External Database | Details |
|---|---|---|
| Ser 115 | - | expression tag |
| Asn 116 | - | expression tag |
| Gly 117 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 189635.7 | |
| Non-Polymers* | Number of molecules | 141 |
| Total formula weight | 9015.8 | |
| All* | Total formula weight | 198651.5 |






